RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZNF426Q9BUY5 554 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 RBM4Q9BWF3 364 aaKnown RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 PTGES2Q9H7Z7 377 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 COQ10BQ9H8M1 238 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 GORASP2Q9H8Y8 452 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 CTPS2Q9NRF8 586 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 CLCF1Q9UBD9 225 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 PEMTQ9UBM1 199 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 OSGIN1Q9UJX0 560 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 PRDM4Q9UKN5 801 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ANGPT4Q9Y264 503 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 RPH3AQ9Y2J0 694 aaPredicted RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 AP3M1Q9Y2T2 418 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 MEMO1Q9Y316 297 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 AP4B1Q9Y6B7 739 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 DNAJC13O75165 2243 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 USP9XQ93008 2570 aaPredicted RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 HIVEP3Q5T1R4 2406 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 MYO18BQ8IUG5 2567 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 A0A0B4J2E0 115 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 A0A0J9YW62 118 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 A0A1B0GX12 115 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 TMEM72A0PK05 275 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 CFAP73A6NFT4 308 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 C5orf58C9J3I9 102 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 FTCDNL1E5RQL4 147 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 H3BNH8 94 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 FFAR1O14842 300 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 BCKDKO14874 412 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ARPC2O15144 300 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 FMO6PO60774 539 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 WDR1O75083 606 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 SERPINB7O75635 380 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 TGM6O95932 706 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 HPGDP15428 266 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ITGA2P17301 1181 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 KLK2P20151 261 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 POU1F1P28069 291 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 CEACAM8P31997 349 aaPredicted RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 APOBEC1P41238 236 aaKnown RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 EIF1P41567 113 aaKnown RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 SLC1A3P43003 542 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 SLC6A8P48029 635 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 IDH2P48735 452 aaKnown RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 P2RY4P51582 365 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 NUP107P57740 925 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 NCALDP61601 193 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 SELENOWP63302 87 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 CBX1P83916 185 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 SELENBP1Q13228 472 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ACSF3Q4G176 576 aaPredicted RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 CYBRD1Q53TN4 286 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 SAMD4BQ5PRF9 694 aaKnown RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 C1orf185Q5T7R7 199 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 INTS11Q5TA45 600 aaKnown RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 NSUN5P2Q63ZY6 315 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 PLXDC2Q6UX71 529 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 C3P1Q6ZMU1 363 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ASRGL1Q7L266 308 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 GRINAQ7Z429 371 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 VTCN1Q7Z7D3 282 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ZNF440Q8IYI8 595 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 NAXEQ8NCW5 288 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 OR5M9Q8NGP3 310 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 OR10Q1Q8NGQ4 319 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ARL5BQ96KC2 179 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 C7orf34Q96L11 122 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 SFXN2Q96NB2 322 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ZNF607Q96SK3 696 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 PIGQQ9BRB3 760 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 TTYH2Q9BSA4 534 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 SRXN1Q9BYN0 137 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 C12orf10Q9HB07 376 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 HHATLQ9HCP6 504 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 MAN2C1Q9NTJ4 1040 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 DCAF13Q9NV06 445 aaKnown RBP3.98□□□□□ -1.77
SMG1-206ENST00000562668 DKKL1Q9UK85 242 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 ACAD8Q9UKU7 415 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 A4GNTQ9UNA3 340 aa3.98□□□□□ -1.77
SMG1-206ENST00000562668 HCFC1P51610 2035 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 MED12LQ86YW9 2145 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 A0A087WUJ7 227 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TMED7-TICAM2A0A0A6YYA0 188 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 A0A1B0GWA3 101 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 SMAD9O15198 467 aaKnown RBP3.97□□□□□ -1.77
SMG1-206ENST00000562668 LRRTM2O43300 516 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ZNF208O43345 1280 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TNFSF13O75888 250 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 PDE5AO76074 875 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 AQP8O94778 261 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 SERPINA1P01009 418 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 OPN1LWP04000 364 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 TPOP07202 933 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 PRSS1P07477 247 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 ABOP16442 354 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 AGAP20933 346 aa3.97□□□□□ -1.77
SMG1-206ENST00000562668 OR1E2P47887 323 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms