RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 A0A075B6Q4 140 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 SMCO3A2RU48 225 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 SUPT3HO75486 399 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 CLPXO76031 633 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 AGTP01019 485 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 SLC26A3P40879 764 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 LHX2P50458 406 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 CCR8P51685 355 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 RPS21P63220 83 aaKnown RBP4.12□□□□□ -1.75
SMG1-204ENST00000561940 CHRNA6Q15825 494 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 ZBED5Q49AG3 693 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 ANKRD26P1Q6NSI1 321 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 PDIK1LQ8N165 341 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 CCDC148Q8NFR7 591 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 PIBF1Q8WXW3 757 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 SLC38A4Q969I6 547 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 HDHD3Q9BSH5 251 aaPredicted RBP4.12□□□□□ -1.75
SMG1-204ENST00000561940 GNPTGQ9UJJ9 305 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 ING4Q9UNL4 249 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 CPDO75976 1380 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 CEMIPQ8WUJ3 1361 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 NRAPQ86VF7 1730 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 LRRIQ1Q96JM4 1722 aa4.12□□□□□ -1.75
SMG1-204ENST00000561940 GOLGB1Q14789 3259 aaKnown RBP4.12□□□□□ -1.75
SMG1-204ENST00000561940 A0A1B0GUA9 196 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 CIB4A0PJX0 185 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 PINLYPA6NC86 204 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 TRIM49D1C9J1S8 452 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 EEDO75530 441 aaKnown RBP4.11□□□□□ -1.75
SMG1-204ENST00000561940 KRT14P02533 472 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 ZNF24P17028 368 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 ZNF30P17039 623 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 CCR6P51684 374 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 RPS15P62841 145 aaKnown RBP4.11□□□□□ -1.75
SMG1-204ENST00000561940 ECH1Q13011 328 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 DEFB115Q30KQ5 88 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 CCDC54Q8NEL0 328 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 RHEBL1Q8TAI7 183 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 BLOC1S5Q8TDH9 187 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 CXorf40AQ8TE69 158 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 GEMIN6Q8WXD5 167 aaKnown RBP4.11□□□□□ -1.75
SMG1-204ENST00000561940 DUS3LQ96G46 650 aaKnown RBP4.11□□□□□ -1.75
SMG1-204ENST00000561940 AURKBQ96GD4 344 aaPredicted RBP4.11□□□□□ -1.75
SMG1-204ENST00000561940 PTTG3PQ9NZH4 202 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 CRB1P82279 1406 aa4.11□□□□□ -1.75
SMG1-204ENST00000561940 LRRIQ3A6PVS8 624 aaPredicted RBP4.1□□□□□ -1.75
SMG1-204ENST00000561940 FAM166BA8MTA8 275 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 HIDE1A8MVS5 230 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 SPECC1L-ADORA2AF8WAN1 911 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 PEX7O00628 323 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 DNAJB6O75190 326 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 CDH16O75309 829 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 UTS2O95399 124 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 H6PDO95479 791 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 NR2C1P13056 603 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 AQP2P41181 271 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 NAA10P41227 235 aaPredicted RBP4.1□□□□□ -1.75
SMG1-204ENST00000561940 SYKP43405 635 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 UGT2B15P54855 530 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 SELENBP1Q13228 472 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 RSPO1Q2MKA7 263 aaPredicted RBP4.1□□□□□ -1.75
SMG1-204ENST00000561940 SPECC1LQ69YQ0 1117 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 IGFL2Q6UWQ7 119 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 ZNF429Q86V71 674 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 MMAAQ8IVH4 418 aaKnown RBP4.1□□□□□ -1.75
SMG1-204ENST00000561940 RNF175Q8N4F7 328 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 OR51G1Q8NGK1 321 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 ZNF502Q8TBZ5 544 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 IL22RA2Q969J5 263 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 CYYR1Q96J86 154 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 PKNOX2Q96KN3 472 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 LINC00167Q96N53 147 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 NAP1L5Q96NT1 182 aaPredicted RBP4.1□□□□□ -1.75
SMG1-204ENST00000561940 CHP1Q99653 195 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 C20orf24Q9BUV8 137 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 OSBPL10Q9BXB5 764 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 RPF2Q9H7B2 306 aaKnown RBP4.1□□□□□ -1.75
SMG1-204ENST00000561940 CTPS2Q9NRF8 586 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 ZNF226Q9NYT6 803 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 GCNT4Q9P109 453 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 PCYOX1Q9UHG3 505 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 NUFIP1Q9UHK0 495 aaKnown RBP4.1□□□□□ -1.75
SMG1-204ENST00000561940 PRO0461Q9UI25 63 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 KIAA1257Q9ULG3 409 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 MAP3K15Q6ZN16 1313 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 NRXN3Q9Y4C0 1643 aa4.1□□□□□ -1.75
SMG1-204ENST00000561940 ZNF816-ZNF321PA0A0X1KG74 233 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 CDC7O00311 574 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 DYNC1I1O14576 645 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 CD5LO43866 347 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 KLHL41O60662 606 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 IGLV2-23P01705 113 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 PCCAP05165 728 aaPredicted RBP4.09□□□□□ -1.75
SMG1-204ENST00000561940 MDKP21741 143 aaPredicted RBP4.09□□□□□ -1.75
SMG1-204ENST00000561940 SERPINB5P36952 375 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 NMUP48645 174 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 NUTF2P61970 127 aaKnown RBP4.09□□□□□ -1.75
SMG1-204ENST00000561940 PAX5Q02548 391 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 KCTD19Q17RG1 926 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms