RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 OR52D1Q9H346 318 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 SYNPO2LQ9H987 977 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 PRODH2Q9UF12 536 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 HDGFL3Q9Y3E1 203 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 OR51B4Q9Y5P0 310 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 SMCO3A2RU48 225 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 DCTN6O00399 190 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 PIN1P1O15428 100 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 OR1F1O43749 312 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 IGSF6O95976 241 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 RPN2P04844 631 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 CD1CP29017 333 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 PRKAG1P54619 331 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 ACTA2P62736 377 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 ACTG2P63267 376 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 GABREP78334 506 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 TMEM31Q5JXX7 168 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 AKR1C8PQ5T2L2 129 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 MBOAT2Q6ZWT7 520 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 VRK2Q86Y07 508 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 DND1Q8IYX4 353 aaKnown RBP16.88■□□□□ 0.29
RAB40C-206ENST00000561781 SYS1Q8N2H4 156 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 CLEC1AQ8NC01 280 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 OR52L1Q8NGH7 329 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 ZG16BQ96DA0 208 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 SPACA1Q9HBV2 294 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BKO60814 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BJP06899 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HNRNPA1P09651 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BOP23527 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BBP33778 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 PTGER1P34995 402 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 FRKP42685 505 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 SCAND1P57086 179 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 FXYD6P3P58550 94 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BDP58876 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 ACTBP60709 375 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BCP62807 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 ACTG1P63261 375 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST2H2BEQ16778 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 C14orf28Q4W4Y0 310 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 LANCL3Q6ZV70 420 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HSD17B11Q8NBQ5 300 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 OR8S1Q8NH09 359 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 RGP1Q92546 391 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BHQ93079 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 PELI1Q96FA3 418 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 PACRGQ96M98 296 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BNQ99877 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 HIST1H2BMQ99879 126 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 PDCD1LG2Q9BQ51 273 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 ZCCHC3Q9NUD5 404 aaKnown RBP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 CD207Q9UJ71 328 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 SLC13A4Q9UKG4 626 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 GMFGO60234 142 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 METTL15P1P0C7V9 234 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 TMIGD3P0DMS9 266 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 KIR3DL2P43630 455 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 TAS2R19P59542 299 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 ZNF529Q6P280 563 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 GABRG1Q8N1C3 465 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 RSC1A1Q92681 617 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 MR1Q95460 341 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 ARHGDIGQ99819 225 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 SLC23A2Q9UGH3 650 aa16.87■□□□□ 0.29
RAB40C-206ENST00000561781 MRPS23Q9Y3D9 190 aaKnown RBP16.87■□□□□ 0.29
RAB40C-206ENST00000561781 ZNF840PA6NDX5 716 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 M0R143 59 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 BHLHE40O14503 412 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 COCHO43405 550 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 KCNAB3O43448 404 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 TSPAN6O43657 245 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 SERPINA4P29622 427 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 SULT1A2P50226 295 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 LTBQ06643 244 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 UBE2V2Q15819 145 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ZNF674Q2M3X9 581 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 TMEM205Q6UW68 189 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 GDF7Q7Z4P5 450 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ROBO4Q8WZ75 1007 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 RAB33BQ9H082 229 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 PRDM7Q9NQW5 492 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 HAO2Q9NYQ3 351 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 STEAP1Q9UHE8 339 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 KCNG2Q9UJ96 466 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 CCL26Q9Y258 94 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 USP34Q70CQ2 3546 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ANAPC1Q9H1A4 1944 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 EIF1AYO14602 144 aaKnown RBP16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ST6GAL1P15907 406 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 EDNRAP25101 427 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 PRSS3P35030 304 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 EIF1AXP47813 144 aaKnown RBP16.86■□□□□ 0.29
RAB40C-206ENST00000561781 SPINT3P49223 89 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 RPS23P62266 143 aaKnown RBP16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ZNHIT3Q15649 155 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-206ENST00000561781 FNDC3BQ53EP0 1204 aaKnown RBP16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ZNF664Q8N3J9 261 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms