RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 HDHD2Q9H0R4 259 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 EMC7Q9NPA0 242 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 CHCHD3Q9NX63 227 aaKnown RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 ASH2LQ9UBL3 628 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 LAMP5Q9UJQ1 280 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 GRIP1Q9Y3R0 1128 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 CHD6Q8TD26 2715 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 IGHV1-18A0A0C4DH31 117 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 A0A1W2PPW3 197 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 PLSCR5A0PG75 271 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 OR6C68A6NDL8 312 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 DPRXA6NFQ7 191 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 ZNF593O00488 134 aaPredicted RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 PHYHO14832 338 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 SURF4O15260 269 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 PRODHO43272 600 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 TPD52L2O43399 206 aaKnown RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 ABHD16AO95870 558 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 IGFBP1P08833 259 aaPredicted RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 CECR9P0C854 216 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 SPI1P17947 270 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 TUBG1P23258 451 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 SLC6A9P48067 706 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 ZNF133P52736 654 aaPredicted RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 ELF3P78545 371 aaPredicted RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 SLC34A1Q06495 639 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 SNTB2Q13425 540 aaKnown RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 EIF2B1Q14232 305 aaKnown RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 RAB35Q15286 201 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 ETFDHQ16134 617 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 ZNF718Q3SXZ3 478 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 ELFN2Q5R3F8 820 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 MEDAGQ5VYS4 303 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 KRT80Q6KB66 452 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 RGS7BPQ6MZT1 257 aaPredicted RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 SLC18B1Q6NT16 456 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 KCTD18Q6PI47 426 aaPredicted RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 NHLRC1Q6VVB1 395 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 CDH24Q86UP0 819 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 DHRSXQ8N5I4 330 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 ZNF454Q8N9F8 522 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 OR51L1Q8NGJ5 315 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 OR8J1Q8NGP2 316 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 OR4Q3Q8NH05 313 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 AKR7LQ8NHP1 331 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 LURAP1Q96LR2 239 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 TSSK2Q96PF2 358 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 DCLRE1CQ96SD1 692 aaKnown RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 OR2H1Q9GZK4 316 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 PLK3Q9H4B4 646 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 TUBG2Q9NRH3 451 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 SMPD3Q9NY59 655 aaPredicted RBP9.33□□□□□ -0.92
TPM1-229ENST00000561242 USE1Q9NZ43 259 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 REV1Q9UBZ9 1251 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 DUSP13Q9UII6 198 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.33□□□□□ -0.92
TPM1-229ENST00000561242 PCDHGB1Q9Y5G3 927 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 N6AMT1Q9Y5N5 214 aa9.33□□□□□ -0.92
TPM1-229ENST00000561242 HEATR5AQ86XA9 2040 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 TVP23AA6NH52 213 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 FAM183AA6NL82 134 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 DEFB108AA8MXU0 73 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 ZNF670-ZNF695F2Z2N8 137 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 F5H5K5 113 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 H3BNX3 289 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 MITFO75030 526 aaPredicted RBP9.32□□□□□ -0.92
TPM1-229ENST00000561242 IGKV3-15P01624 115 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 GYPBP06028 91 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 H2BFMP0C1H6 154 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 COX5BP10606 129 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 APEX1P27695 318 aaKnown RBP9.32□□□□□ -0.92
TPM1-229ENST00000561242 SERPINF1P36955 418 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 GRB2P62993 217 aaKnown RBP9.32□□□□□ -0.92
TPM1-229ENST00000561242 IL5RAQ01344 420 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 FHL1Q13642 323 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 APOFQ13790 326 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 NKPD1Q17RQ9 610 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 ZMAT1Q5H9K5 638 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 SLX4IPQ5VYV7 408 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 ACSM5Q6NUN0 579 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 KRT77Q7Z794 578 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 ZBTB46Q86UZ6 589 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 LSRQ86X29 649 aaPredicted RBP9.32□□□□□ -0.92
TPM1-229ENST00000561242 ZNF295-AS1Q8N0V1 137 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 MUC15Q8N387 334 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 ZNF283Q8N7M2 679 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 ZNF611Q8N823 705 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 OR8D4Q8NGM9 314 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 OR1J1Q8NGS3 322 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 OR1F12Q8NHA8 337 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 TMEM163Q8TC26 289 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 ASB17Q8WXJ9 295 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 NINJ1Q92982 152 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 FBXO17Q96EF6 278 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 C4orf45Q96LM5 186 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 IL4I1Q96RQ9 567 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 MNTQ99583 582 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 VRK1Q99986 396 aaPredicted RBP9.32□□□□□ -0.92
TPM1-229ENST00000561242 HCAR1Q9BXC0 346 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms