RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 DOK1Q99704 481 aa2.18□□□□□ -2.06
PSMA4-221ENST00000560842 LZTS2Q9BRK4 669 aa2.18□□□□□ -2.06
PSMA4-221ENST00000560842 ST3GAL6Q9Y274 331 aa2.18□□□□□ -2.06
PSMA4-221ENST00000560842 TMED5Q9Y3A6 229 aa2.18□□□□□ -2.06
PSMA4-221ENST00000560842 CNTNAP1P78357 1384 aa2.18□□□□□ -2.06
PSMA4-221ENST00000560842 DPM1O60762 260 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 CST1P01037 141 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 APCSP02743 223 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 CD74P04233 296 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 C1GALT1C1LP0DN25 315 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 RNASE2P10153 161 aaKnown RBP2.17□□□□□ -2.06
PSMA4-221ENST00000560842 CASP14P31944 242 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 OPRK1P41145 380 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 SLC25A11Q02978 314 aaKnown RBP2.17□□□□□ -2.06
PSMA4-221ENST00000560842 TWF1Q12792 350 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 ECH1Q13011 328 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 RGNQ15493 299 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 ZSCAN26Q16670 478 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 LGI3Q8N145 548 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 FBXL13Q8NEE6 735 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 OR8U1Q8NH10 309 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 COQ8AQ8NI60 647 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 L3HYPDHQ96EM0 354 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 DUS3LQ96G46 650 aaKnown RBP2.17□□□□□ -2.06
PSMA4-221ENST00000560842 SERPINB12Q96P63 405 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 CAMK2N2Q96S95 79 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 ZNF382Q96SR6 550 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 FOXC2Q99958 501 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 FAM49BQ9NUQ9 324 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 CTSFQ9UBX1 484 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 KCNE3Q9Y6H6 103 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 YEATS2Q9ULM3 1422 aa2.17□□□□□ -2.06
PSMA4-221ENST00000560842 ZNF816-ZNF321PA0A0X1KG74 233 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 ARHGEF35A5YM69 484 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 ZNF850A8MQ14 1090 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 CDC7O00311 574 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 NDUFB10O96000 172 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 HLA-DQA1P01909 254 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 GPX4P36969 197 aaPredicted RBP2.16□□□□□ -2.06
PSMA4-221ENST00000560842 NSG1P42857 185 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 CXCL12P48061 93 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 CCNHP51946 323 aaPredicted RBP2.16□□□□□ -2.06
PSMA4-221ENST00000560842 YWHAGP61981 247 aaKnown RBP eCLIP2.16□□□□□ -2.06
PSMA4-221ENST00000560842 ACTG2P63267 376 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 TGFBIQ15582 683 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 ANKRD26P1Q6NSI1 321 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 EID2Q8N6I1 236 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 ARL6IP6Q8N6S5 226 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 RBMXL1Q96E39 390 aaKnown RBP2.16□□□□□ -2.06
PSMA4-221ENST00000560842 PKNOX2Q96KN3 472 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 RACGAP1Q9H0H5 632 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 NUP50Q9UKX7 468 aa2.16□□□□□ -2.06
PSMA4-221ENST00000560842 CSDC2Q9Y534 153 aaKnown RBP2.16□□□□□ -2.06
PSMA4-221ENST00000560842 NUP214P35658 2090 aaPredicted RBP2.15□□□□□ -2.07
PSMA4-221ENST00000560842 CRYGBP07316 175 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 OR56A5P0C7T3 313 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 UBTFL6P0CB48 400 aaPredicted RBP2.15□□□□□ -2.07
PSMA4-221ENST00000560842 OR5H8P0DN80 308 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 SLC2A3P11169 496 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 FOXN2P32314 431 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 SLC11A1P49279 550 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 ORMDL2Q53FV1 153 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 AVPI1Q5T686 147 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 PLET1Q6UQ28 207 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 CERS6Q6ZMG9 384 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 NIPA1Q7RTP0 329 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 CALHM1Q8IU99 346 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 CDKL3Q8IVW4 592 aaPredicted RBP2.15□□□□□ -2.07
PSMA4-221ENST00000560842 PRSS58Q8IYP2 241 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 LIX1Q8N485 282 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 B3GNT7Q8NFL0 401 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 OR4K5Q8NGD3 323 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 FGF20Q9NP95 211 aaPredicted RBP2.15□□□□□ -2.07
PSMA4-221ENST00000560842 KLHL28Q9NXS3 571 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 LSM7Q9UK45 103 aaKnown RBP2.15□□□□□ -2.07
PSMA4-221ENST00000560842 STARD10Q9Y365 291 aa2.15□□□□□ -2.07
PSMA4-221ENST00000560842 GPR179Q6PRD1 2367 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 IGLV1-36A0A0B4J1U3 117 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 IGHV1OR15-9A0A0B4J2B8 117 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 GLYATL1P3A0A0U1RQE8 302 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 TSPAN13O95857 204 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF250P15622 560 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 DTYMKP23919 212 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 F2RP25116 425 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF616Q08AN1 781 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 PTPN20Q4JDL3 420 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 SMUG1Q53HV7 270 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 PRAMEF5Q5TYX0 476 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 PRAMEF6Q5VXH4 476 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 METTL21CQ5VZV1 264 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 SPATA4Q8NEY3 305 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 OR13C2Q8NGS9 318 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 LINC01560Q8TB33 94 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 PIFOQ8TCI5 191 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 NTAN1Q96AB6 310 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 FLYWCH2Q96CP2 140 aaKnown RBP2.14□□□□□ -2.07
PSMA4-221ENST00000560842 CNDP1Q96KN2 507 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 TIMM29Q9BSF4 260 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 ILKAPQ9H0C8 392 aaPredicted RBP2.14□□□□□ -2.07
PSMA4-221ENST00000560842 KCNJ16Q9NPI9 418 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms