RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 EMC7Q9NPA0 242 aa8.71□□□□□ -1.02
LDLR-214ENST00000560628 NKIRAS2Q9NYR9 191 aa8.71□□□□□ -1.02
LDLR-214ENST00000560628 GRHPRQ9UBQ7 328 aa8.71□□□□□ -1.02
LDLR-214ENST00000560628 ADAM18Q9Y3Q7 739 aa8.71□□□□□ -1.02
LDLR-214ENST00000560628 GMNCA6NCL1 334 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 PRSS23O95084 383 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 IGHV1-46P01743 117 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 TFP02787 698 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 MT-ND5P03915 603 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 MSMBP08118 114 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 CD14P08571 375 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 MSR1P21757 451 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 SLC9A3P48764 834 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 NUDT2P50583 147 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 PSME3P61289 254 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 PCBD1P61457 104 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 TEKQ02763 1124 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 HNRNPA0Q13151 305 aaKnown RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 ZBED5Q49AG3 693 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 FAM205BPQ63HN1 556 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 C8orf82Q6P1X6 216 aaPredicted RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 FAHD2BQ6P2I3 314 aaPredicted RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 THSD4Q6ZMP0 1018 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 FOXL2NBQ6ZUU3 175 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 RFPL4BQ6ZWI9 263 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 CYP4Z1Q86W10 505 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 FNDC8Q8TC99 324 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 KLF14Q8TD94 323 aaPredicted RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 IPCEF1Q8WWN9 437 aaPredicted RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 CCL17Q92583 94 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 FAHD2AQ96GK7 314 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 C4orf45Q96LM5 186 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 KCTD14Q9BQ13 255 aaPredicted RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 RERGLQ9H628 205 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 METTL17Q9H7H0 456 aaPredicted RBP8.7□□□□□ -1.02
LDLR-214ENST00000560628 POLE4Q9NR33 117 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 ENPP4Q9Y6X5 453 aa8.7□□□□□ -1.02
LDLR-214ENST00000560628 PLSCR5A0PG75 271 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 ZSCAN5BA6NJL1 495 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 C12orf71A8MTZ7 269 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 XKRYO14609 159 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 IMPA2O14732 288 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 TCF21O43680 179 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 PTP4A3O75365 173 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 RGS9O75916 674 aaPredicted RBP8.69□□□□□ -1.02
LDLR-214ENST00000560628 DIRAS1O95057 198 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 MPZL1O95297 269 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 H1F0P07305 194 aaKnown RBP8.69□□□□□ -1.02
LDLR-214ENST00000560628 PCMT1P22061 227 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 RBMXP38159 391 aaKnown RBP8.69□□□□□ -1.02
LDLR-214ENST00000560628 MMP15P51511 669 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 HFEQ30201 348 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 ANKDD1AQ495B1 522 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 SPRNQ5BIV9 151 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 MBNL2Q5VZF2 373 aaKnown RBP8.69□□□□□ -1.02
LDLR-214ENST00000560628 GLYATQ6IB77 296 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 UNQ6126/PRO20091Q6UXV3 157 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 HACD2Q6Y1H2 254 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 TMPRSS11FQ6ZWK6 438 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 RFLNBQ8N5W9 214 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 RNF148Q8N7C7 305 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 OR51F2Q8NH61 342 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 SLC7A13Q8TCU3 470 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 RASD2Q96D21 266 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 POFUT1Q9H488 388 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 ZNF665Q9H7R5 613 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 SAP30LQ9HAJ7 183 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 MSL2Q9HCI7 577 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 IL20RAQ9UHF4 553 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 GRIP1Q9Y3R0 1128 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 FAM32AQ9Y421 112 aaKnown RBP8.69□□□□□ -1.02
LDLR-214ENST00000560628 WIPI2Q9Y4P8 454 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 MXRA5Q9NR99 2828 aa8.69□□□□□ -1.02
LDLR-214ENST00000560628 STAB1Q9NY15 2570 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 TEX13CA0A0J9YWL9 993 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 TRBV4-1A0A0J9YWV2 114 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 PRSS37A4D1T9 235 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 CLDN25C9JDP6 229 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 SOCS2O14508 198 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 PLPP2O43688 288 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 TIMM8AO60220 97 aaPredicted RBP8.68□□□□□ -1.02
LDLR-214ENST00000560628 SLC16A7O60669 478 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 ANPEPP15144 967 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 CTLA4P16410 223 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 ITGA2P17301 1181 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 HTR5AP47898 357 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 ARHGDIAP52565 204 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 PSG7Q13046 419 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 MESTQ5EB52 335 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 FGD3Q5JSP0 725 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 ACSM5Q6NUN0 579 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 SHQ1Q6PI26 577 aaKnown RBP8.68□□□□□ -1.02
LDLR-214ENST00000560628 FAM122BQ7Z309 247 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 FAM86B1Q8N7N1 296 aa8.68□□□□□ -1.02
LDLR-214ENST00000560628 OR52J3Q8NH60 311 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms