RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 HAO2Q9NYQ3 351 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 GLTPQ9NZD2 209 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 CLCF1Q9UBD9 225 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 UPB1Q9UBR1 384 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 AASSQ9UDR5 926 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 B9D1Q9UPM9 204 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 EXOSC1Q9Y3B2 195 aaKnown RBP10.38□□□□□ -0.75
LDLR-212ENST00000560467 PCDHGB5Q9Y5G0 923 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 FLVCR1Q9Y5Y0 555 aa10.38□□□□□ -0.75
LDLR-212ENST00000560467 ARHGAP21Q5T5U3 1957 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 DAPL1A0PJW8 107 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 ZNF716A6NP11 495 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 ZNF814B7Z6K7 855 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 H7C1C5 153 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 PHYHO14832 338 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 CASKO14936 926 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 MYL12BO14950 172 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 TNFSF13O75888 250 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 QDPRP09417 244 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 OR2T7P0C7T2 308 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 ATP6V1B1P15313 513 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 CAPZA2P47755 286 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 LCN6P62502 163 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 MVKQ03426 396 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 ZNF362Q5T0B9 420 aaPredicted RBP10.37□□□□□ -0.75
LDLR-212ENST00000560467 PRSS48Q7RTY5 328 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 GLB1L2Q8IW92 636 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 LRRC75A-AS1Q8N1F1 130 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 ACBD7Q8N6N7 88 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 NOXO1Q8NFA2 376 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 OR10H4Q8NGA5 316 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 OR51G2Q8NGK0 314 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 OR2T27Q8NH04 317 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 FCGR1BQ92637 280 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 GGHQ92820 318 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 ZNF775Q96BV0 537 aaPredicted RBP10.37□□□□□ -0.75
LDLR-212ENST00000560467 PERPQ96FX8 193 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 ZFP3Q96NJ6 502 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 OR2M2Q96R28 347 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 KCNK17Q96T54 332 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
LDLR-212ENST00000560467 ULBP2Q9BZM5 246 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 NMNAT2Q9BZQ4 307 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 RACGAP1Q9H0H5 632 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 DUSP21Q9H596 190 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 SEC61A2Q9H9S3 476 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 UBTD1Q9HAC8 227 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 MRPS18AQ9NVS2 196 aaKnown RBP10.37□□□□□ -0.75
LDLR-212ENST00000560467 POLR1DQ9Y2S0 133 aa10.37□□□□□ -0.75
LDLR-212ENST00000560467 A8MXE2 369 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 ZNF670-ZNF695F2Z2N8 137 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 RAMP1O60894 148 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 AQP8O94778 261 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 FARS2O95363 451 aaKnown RBP10.36□□□□□ -0.75
LDLR-212ENST00000560467 TGM6O95932 706 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 GYPBP06028 91 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 CDK1P06493 297 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 CRHP06850 196 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 PGA4P0DJD7 388 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 PGA3P0DJD8 388 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 NPR2P20594 1047 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 LAP3P28838 519 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 CCKARP32238 428 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 PYCR1P32322 319 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 NR1H2P55055 460 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 SLC35A2P78381 396 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 FAM27E3Q08E93 113 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 SHFQ7M4L6 423 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 BCDIN3DQ7Z5W3 292 aaKnown RBP10.36□□□□□ -0.75
LDLR-212ENST00000560467 ZBTB46Q86UZ6 589 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 TUSC5Q8IXB3 177 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 C20orf196Q8IYI0 205 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 OR6V1Q8N148 313 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 BBS1Q8NFJ9 593 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 OR51L1Q8NGJ5 315 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 OR2AJ1Q8NGZ0 328 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 SNX33Q8WV41 574 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 NSMAFQ92636 917 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 PIGTQ969N2 578 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 LGALS12Q96DT0 336 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 ZMYND19Q96E35 227 aaPredicted RBP10.36□□□□□ -0.75
LDLR-212ENST00000560467 PIK3IP1Q96FE7 263 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 WFIKKN1Q96NZ8 548 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 ZNF385AQ96PM9 386 aaKnown RBP10.36□□□□□ -0.75
LDLR-212ENST00000560467 HS3ST6Q96QI5 342 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 INTS14Q96SY0 518 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 CCL19Q99731 98 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 MND1Q9BWT6 205 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 MRPL13Q9BYD1 178 aaKnown RBP10.36□□□□□ -0.75
LDLR-212ENST00000560467 YIPF3Q9GZM5 350 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 PIGMQ9H3S5 423 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 DIMT1Q9UNQ2 313 aaKnown RBP10.36□□□□□ -0.75
LDLR-212ENST00000560467 COMMD3-BMI1R4GMX3 469 aa10.36□□□□□ -0.75
LDLR-212ENST00000560467 SONP18583 2426 aaKnown RBP10.36□□□□□ -0.75
LDLR-212ENST00000560467 A0A1W2PPL8 197 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 ZNF587BE7ETH6 402 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 TACSTD2P09758 323 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 TGFBR3Q03167 851 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms