RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 OR52D1Q9H346 318 aa9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 C1orf198Q9H425 327 aa9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 KRCC1Q9NPI7 259 aaPredicted RBP9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 VSX1Q9NZR4 365 aaPredicted RBP9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 REV1Q9UBZ9 1251 aa9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 TMCC3Q9ULS5 477 aa9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 COA3Q9Y2R0 106 aaPredicted RBP9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 LYVE1Q9Y5Y7 322 aa9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 ATRQ13535 2644 aa9.99□□□□□ -0.81
RABGGTA-216ENST00000560243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.99□□□□□ -0.812e-6■■■□□ 18.8
RABGGTA-216ENST00000560243 IGHV4-61A0A0C4DH41 118 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 A0A1W2PPW3 197 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 LOC390937A0A1W2PQ73 354 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 C12orf71A8MTZ7 269 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 ACOT8O14734 319 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 AHCYL1O43865 530 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 UBOX5O94941 541 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 CSF3P09919 207 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 ZNF250P15622 560 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 USF1P22415 310 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 GUCA1AP43080 201 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 NR4A2P43354 598 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 GDI2P50395 445 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 HMGA2P52926 109 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 GGTLC2Q14390 218 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 RFX4Q33E94 735 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 SPATA46Q5T0L3 261 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 ZNF770Q6IQ21 691 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 RGS7BPQ6MZT1 257 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 C1orf94Q6P1W5 598 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 RFPL4BQ6ZWI9 263 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 TRPM8Q7Z2W7 1104 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 OR1J2Q8NGS2 313 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 OR1J1Q8NGS3 322 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 NEU4Q8WWR8 484 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 BTBD10Q9BSF8 475 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 THTPAQ9BU02 230 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 NDEL1Q9GZM8 345 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 LRMDAQ9H2I8 198 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 EGLN3Q9H6Z9 239 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 YAE1D1Q9NRH1 226 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 PRPF19Q9UMS4 504 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 TIMM10BQ9Y5J6 103 aa9.98□□□□□ -0.81
RABGGTA-216ENST00000560243 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 IGLV1-36A0A0B4J1U3 117 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 TNFRSF11BO00300 401 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 CD5LO43866 347 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 KHDRBS3O75525 346 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 NCR1O76036 304 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 STAMBPO95630 424 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 NGFP01138 241 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 HPXP02790 462 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 APEHP13798 732 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 HIST1H1CP16403 213 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 SLC6A6P31641 620 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 MPV17P39210 176 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 RAD52P43351 418 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 RPS6KA3P51812 740 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 KLF3P57682 345 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 PCBD1P61457 104 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 GLO1Q04760 184 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 TSPAN31Q12999 210 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 MEP1BQ16820 701 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 MTX3Q5HYI7 312 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 ELFN2Q5R3F8 820 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 ZNF620Q6ZNG0 422 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 ADCK1Q86TW2 530 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 GLB1L2Q8IW92 636 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 OR4K13Q8NH42 304 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 SYNPRQ8TBG9 265 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 GNPDA2Q8TDQ7 276 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 UBASH3BQ8TF42 649 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 C11orf40Q8WZ69 217 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 SLC7A6Q92536 515 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 ASB9Q96DX5 294 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 NMNAT3Q96T66 252 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 PIMREGQ9BSJ6 248 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 IFT27Q9BW83 186 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 BCL2L14Q9BZR8 327 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 BPESC1Q9GZL8 116 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 C1orf21Q9H246 121 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 MUC13Q9H3R2 512 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 FN3KQ9H479 309 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 MAGIXQ9H6Y5 334 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 TAAR3PQ9P1P4 343 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 FBXO9Q9UK97 447 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 U3KQV3 271 aa9.97□□□□□ -0.81
RABGGTA-216ENST00000560243 LRP5LA4QPB2 252 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 NDUFS8O00217 210 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 ARPC3O15145 178 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 KRT36O76013 467 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 GASTP01350 101 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 ERCC1P07992 297 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 IGHV4-31P0DP07 118 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 COL8A2P25067 703 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 GIFP27352 417 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 IFNGR2P38484 337 aa9.96□□□□□ -0.82
RABGGTA-216ENST00000560243 MAGEB1P43366 347 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms