RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 OR52J3Q8NH60 311 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 HPS1Q92902 700 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 FUZQ9BT04 418 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 C1orf198Q9H425 327 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 POLE4Q9NR33 117 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 DCAF16Q9NXF7 216 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 SIGLEC7Q9Y286 467 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 TANC2Q9HCD6 1990 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 SNX3O60493 162 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 IGHV1-46P01743 117 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 IGHV3-13P01766 116 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 CD14P08571 375 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 RPL4P36578 427 aaKnown RBP15.09■□□□□ 0.01
HDDC3-205ENST00000559898 MMP15P51511 669 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 RINLQ6ZS11 566 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 RNF113BQ8IZP6 322 aaKnown RBP15.09■□□□□ 0.01
HDDC3-205ENST00000559898 ABHD4Q8TB40 342 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 BCL2L14Q9BZR8 327 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 KCNN2Q9H2S1 579 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 DCAF13Q9NV06 445 aaKnown RBP15.09■□□□□ 0.01
HDDC3-205ENST00000559898 ADA2Q9NZK5 511 aa15.09■□□□□ 0.01
HDDC3-205ENST00000559898 STX18Q9P2W9 335 aaKnown RBP15.09■□□□□ 0.01
HDDC3-205ENST00000559898 TMEFF2Q9UIK5 374 aaPredicted RBP15.09■□□□□ 0.01
HDDC3-205ENST00000559898 SPRY3O43610 288 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 ENTPD5O75356 428 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 PTHP01270 115 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 SEMG1P04279 462 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 H1F0P07305 194 aaKnown RBP15.08■□□□□ 0
HDDC3-205ENST00000559898 IFNA8P32881 189 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 GDI2P50395 445 aaKnown RBP15.08■□□□□ 0
HDDC3-205ENST00000559898 ERFP50548 548 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 FGD3Q5JSP0 725 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 TMEM154Q6P9G4 183 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 USP51Q70EK9 711 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 KLF14Q8TD94 323 aaPredicted RBP15.08■□□□□ 0
HDDC3-205ENST00000559898 ZNF570Q96NI8 536 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 TSSK2Q96PF2 358 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 ARL8BQ9NVJ2 186 aa15.08■□□□□ 0
HDDC3-205ENST00000559898 PRSS37A4D1T9 235 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 A6NIZ1 184 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 DCTN6O00399 190 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 SOCS2O14508 198 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 GAAP10253 952 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 MSR1P21757 451 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 CDKN2AP42771 156 aaKnown RBP15.07■□□□□ 0
HDDC3-205ENST00000559898 RAP1BP61224 184 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 PPP1CBP62140 327 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 RAP1AP62834 184 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 KRR1Q13601 381 aaKnown RBP15.07■□□□□ 0
HDDC3-205ENST00000559898 RSRC1Q96IZ7 334 aaKnown RBP15.07■□□□□ 0
HDDC3-205ENST00000559898 DHRS1Q96LJ7 313 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 REPIN1Q9BWE0 567 aaKnown RBP15.07■□□□□ 0
HDDC3-205ENST00000559898 SYT4Q9H2B2 425 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 LRMDAQ9H2I8 198 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 RERGLQ9H628 205 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 MSL2Q9HCI7 577 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 GRHPRQ9UBQ7 328 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 COA3Q9Y2R0 106 aaPredicted RBP15.07■□□□□ 0
HDDC3-205ENST00000559898 TIMM10BQ9Y5J6 103 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 IER3IP1Q9Y5U9 82 aa15.07■□□□□ 0
HDDC3-205ENST00000559898 FBN3Q75N90 2809 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 A0A1W2PRQ8 180 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 HTR3EA5X5Y0 456 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 AVPP01185 164 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 PRDX6P30041 224 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 CRYBB2P43320 205 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 ZNF81P51508 661 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 DVL1P1P54792 670 aaPredicted RBP15.06■□□□□ 0
HDDC3-205ENST00000559898 TMEM33P57088 247 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 DGCR6Q14129 220 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 MEP1BQ16820 701 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 MBNL2Q5VZF2 373 aaKnown RBP15.06■□□□□ 0
HDDC3-205ENST00000559898 FAM205BPQ63HN1 556 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 C1orf229Q6ZS94 237 aaPredicted RBP15.06■□□□□ 0
HDDC3-205ENST00000559898 SNX33Q8WV41 574 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 TMEM158Q8WZ71 300 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 CMTM5Q96DZ9 223 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 C4orf45Q96LM5 186 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 SPAG4Q9NPE6 437 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 NRIP3Q9NQ35 241 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 HIF1ANQ9NWT6 349 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 SLCO1C1Q9NYB5 712 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 CD300AQ9UGN4 299 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 RPS6KA6Q9UK32 745 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 STAB1Q9NY15 2570 aa15.06■□□□□ 0
HDDC3-205ENST00000559898 IGHV1-69-2A0A0G2JMI3 117 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 UNC119BA6NIH7 251 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 DOK2O60496 412 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 SLC16A7O60669 478 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 DEAF1O75398 565 aaPredicted RBP15.05■□□□□ -0
HDDC3-205ENST00000559898 PPP1R3DO95685 299 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 DBHP09172 617 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 RHCEP18577 417 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 SELENOVP59797 346 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 MRPS11P82912 194 aaKnown RBP15.05■□□□□ -0
HDDC3-205ENST00000559898 PSG7Q13046 419 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 ZNF718Q3SXZ3 478 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 ANKDD1AQ495B1 522 aa15.05■□□□□ -0
HDDC3-205ENST00000559898 CCDC92Q53HC0 331 aaPredicted RBP15.05■□□□□ -0
HDDC3-205ENST00000559898 Q6ZR03 302 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms