RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 ZNF416Q9BWM5 594 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 TSSK6Q9BXA6 273 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 ZNF442Q9H7R0 627 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 NTN4Q9HB63 628 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 SRA1Q9HD15 236 aaKnown RBP11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 TBC1D23Q9NUY8 699 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 BAIAP2Q9UQB8 552 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 MED13LQ71F56 2210 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 SOX14O95416 240 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 ANXA8P13928 327 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 SERPINF1P36955 418 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 ADAM8P78325 824 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 PSG4Q00888 419 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 GALK2Q01415 458 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 C11orf71Q6IPW1 123 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 KRT80Q6KB66 452 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 VHLLQ6RSH7 139 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 PRSS57Q6UWY2 283 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 LNX2Q8N448 690 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 OR2T33Q8NG76 320 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 OR52E2Q8NGJ4 325 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 OR8D4Q8NGM9 314 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 OR1J2Q8NGS2 313 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 B9D1Q9UPM9 204 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 LRRC42Q9Y546 428 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 DCTN6O00399 190 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 TP53P04637 393 aaPredicted RBP11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 SCG5P05408 212 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 IGFBP1P08833 259 aaPredicted RBP11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 OR4A8P0C604 315 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 PRKACGP22612 351 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 FASP25445 335 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 APLNRP35414 380 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 CDKN1AP38936 164 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 ATP5J2P56134 94 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 LSM6P62312 80 aaKnown RBP11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 ENDOGQ14249 297 aaKnown RBP11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 ADIPOQQ15848 244 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 TBC1D28Q2M2D7 210 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 SHQ1Q6PI26 577 aaKnown RBP11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 OR6V1Q8N148 313 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 NPEPL1Q8NDH3 523 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 CPEB3Q8NE35 698 aaKnown RBP11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 SDR9C7Q8NEX9 313 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 FAM81AQ8TBF8 368 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 FOXN4Q96NZ1 517 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 BDH2Q9BUT1 245 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 RPRD1BQ9NQG5 326 aaKnown RBP11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 FKBP7Q9Y680 259 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 PMF1-BGLAPU3KQ54 211 aa11.82□□□□□ -0.52
CHRNB4-204ENST00000559849 OR6C68A6NDL8 312 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 B9A039 149 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 H3BN98 237 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 SNAP29O95721 258 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 STOMP27105 288 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 APEX1P27695 318 aaKnown RBP11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 THBS4P35443 961 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 GLRXP35754 106 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 GLO1Q04760 184 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 SNTB2Q13425 540 aaKnown RBP11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 SWI5Q1ZZU3 235 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 MST1LQ2TV78 715 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 SLC36A3Q495N2 470 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 ZNF362Q5T0B9 420 aaPredicted RBP11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 UGT2A3Q6UWM9 527 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 ZBTB46Q86UZ6 589 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 HS3ST5Q8IZT8 346 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 TEX47Q8TBZ9 253 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 OR2H1Q9GZK4 316 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 RACGAP1Q9H0H5 632 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 CDH20Q9HBT6 801 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 EMC7Q9NPA0 242 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 REV1Q9UBZ9 1251 aa11.81□□□□□ -0.52
CHRNB4-204ENST00000559849 IGLV1-36A0A0B4J1U3 117 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 FCGR1AP12314 374 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 CCL2P13500 99 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 CENPAP49450 140 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 ATP6AP1Q15904 470 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 KCNMB1Q16558 191 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 Q5PR19 223 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 TGIF2LYQ8IUE0 185 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 ATG16L2Q8NAA4 619 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 PYDC1Q8WXC3 89 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 DDOQ99489 341 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 CACNG6Q9BXT2 260 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 S100A14Q9HCY8 104 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 CMAHPQ9Y471 501 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 MPZL1O95297 269 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 RAD52P43351 418 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 RPS23P62266 143 aaKnown RBP11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 SLC34A1Q06495 639 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 SCRN3Q0VDG4 424 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 AQP6Q13520 282 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 RAB35Q15286 201 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 EFNB3Q15768 340 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 WFDC11Q8NEX6 87 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 OR5K1Q8NHB7 308 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 AKR7LQ8NHP1 331 aa11.8□□□□□ -0.52
CHRNB4-204ENST00000559849 WNT5BQ9H1J7 359 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms