RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TMEM186Q96B77 213 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 DGCR14Q96DF8 476 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 SLC47A1Q96FL8 570 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 CENPNQ96H22 339 aaPredicted RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 TSC22D3Q99576 134 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 ARHGDIGQ99819 225 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 FOXB1Q99853 325 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 TMEM43Q9BTV4 400 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 C9orf16Q9BUW7 83 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 ZNF426Q9BUY5 554 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 OSBPL10Q9BXB5 764 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 YTHDF1Q9BYJ9 559 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 MRPS26Q9BYN8 205 aaKnown RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 ULBP2Q9BZM5 246 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 MS4A5Q9H3V2 200 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 ARMC7Q9H6L4 198 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 METTL17Q9H7H0 456 aaPredicted RBP4.94□□□□□ -1.62
USP3-215ENST00000559771 RMND5AQ9H871 391 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 LPAR2Q9HBW0 351 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 HIF1ANQ9NWT6 349 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 MAGEL2Q9UJ55 1249 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 CORINQ9Y5Q5 1042 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 SNX13Q9Y5W8 968 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 CACNG2Q9Y698 323 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 COMMD3-BMI1R4GMX3 469 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 TANC2Q9HCD6 1990 aa4.94□□□□□ -1.62
USP3-215ENST00000559771 LOC105371242A0A075B767 164 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 A0A0A6YYJ9 748 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 TMEM89A2RUT3 159 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 M0R3H8 397 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 FXYD1O00168 92 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 FSHBP01225 129 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 MMP7P09237 267 aaPredicted RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 ASAH2BP0C7U1 165 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 PGA4P0DJD7 388 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 PGA3P0DJD8 388 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 SAGP10523 405 aaPredicted RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 ZNF250P15622 560 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 GTF2E2P29084 291 aaKnown RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 AQP1P29972 269 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 GPR6P46095 362 aaPredicted RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 BIDP55957 195 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 TMEM33P57088 247 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 HILS1P60008 231 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 ZP4Q12836 540 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 PMS2P3Q13401 168 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 NFYCQ13952 458 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 SELPLGQ14242 412 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 ZNF74Q16587 644 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 HIST3H3Q16695 136 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 ALKBH6Q3KRA9 238 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 SPRNQ5BIV9 151 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 GCNT6Q5T4J0 391 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 LPCAT4Q643R3 524 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 ZBTB49Q6ZSB9 765 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 PIWIL3Q7Z3Z3 882 aaKnown RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 GLCCI1Q86VQ1 547 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 RBM45Q8IUH3 476 aaKnown RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 SLC22A24Q8N4F4 322 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 OR6T1Q8NGN1 323 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 OR6X1Q8NH79 312 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 NMD3Q96D46 503 aaKnown RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 RDH12Q96NR8 316 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 SEPHS2Q99611 448 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 PKP2Q99959 881 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 SH3GL3Q99963 347 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 KCTD14Q9BQ13 255 aaPredicted RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 PRSS27Q9BQR3 290 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 CPPED1Q9BRF8 314 aaPredicted RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 ASPNQ9BXN1 380 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 MRPL13Q9BYD1 178 aaKnown RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 ANKRD60Q9BZ19 345 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 TMEM38AQ9H6F2 299 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 GORASP2Q9H8Y8 452 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 VCX3AQ9NNX9 186 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 ESM1Q9NQ30 184 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 MEPEQ9NQ76 525 aaPredicted RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 TMEM38BQ9NVV0 291 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 GLTPQ9NZD2 209 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 RPS6KB2Q9UBS0 482 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 TESQ9UGI8 421 aaKnown RBP4.93□□□□□ -1.62
USP3-215ENST00000559771 OPN4Q9UHM6 478 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 DUSP13Q9UII6 198 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 POFUT2Q9Y2G5 429 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 NOX1Q9Y5S8 564 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 ARHGAP32A7KAX9 2087 aa4.93□□□□□ -1.62
USP3-215ENST00000559771 CMYA5Q8N3K9 4069 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 IGKV1D-43A0A0B4J1Z2 117 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 TMEM247A6NEH6 219 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 C17orf100A8MU93 164 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 VSTM5A8MXK1 200 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 C5orf58C9J3I9 102 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 C11orf98E9PRG8 122 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 H0YAE9 185 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 ZNF701M0R085 212 aaPredicted RBP4.92□□□□□ -1.62
USP3-215ENST00000559771 NME4O00746 187 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 PPIHO43447 177 aaKnown RBP4.92□□□□□ -1.62
USP3-215ENST00000559771 KCNAB3O43448 404 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 PLPP2O43688 288 aa4.92□□□□□ -1.62
USP3-215ENST00000559771 CDC14BO60729 498 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms