RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 NUBPLQ8TB37 319 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 CD300LFQ8TDQ1 290 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 KCTD12Q96CX2 325 aaKnown RBP9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF681Q96N22 645 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 DDOQ99489 341 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 MED17Q9NVC6 651 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 NDUFB11Q9NX14 153 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 SDHAF2Q9NX18 166 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 MED29Q9NX70 200 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 TAS2R8Q9NYW2 309 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 VSX1Q9NZR4 365 aaPredicted RBP9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 SLC23A1Q9UHI7 598 aa9.65□□□□□ -0.86
CARMIL3-202ENST00000559694 TRAV18A0A075B6X5 111 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 PRSS23O95084 383 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 MAKP20794 623 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 GDNFP39905 211 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 ETV5P41161 510 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 MEOX1P50221 254 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC37A1P57057 533 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 EXOSC2Q13868 293 aaKnown RBP9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 GSG1LQ6UXU4 331 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 LINC00346Q8IVM7 164 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 ROBO4Q8WZ75 1007 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 HOXB13Q92826 284 aaPredicted RBP9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 ZC3HAV1LQ96H79 300 aaKnown RBP9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 C4orf36Q96KX1 117 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 HCAR1Q9BXC0 346 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC25A18Q9H1K4 315 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 BIN3Q9NQY0 253 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 TRAPPC4Q9Y296 219 aa9.65□□□□□ -0.87
CARMIL3-202ENST00000559694 LOC102725191A0A1B0GVB3 256 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 ALG1L2C9J202 215 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 SOCS6O14544 535 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 SGCEO43556 437 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 DPM1O60762 260 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 ANKRD34CP0C6C1 535 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 PIPP12273 146 aaPredicted RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 CEACAM1P13688 526 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 VEGFCP49767 419 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 SNU13P55769 128 aaKnown RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF117Q03924 483 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 ACKR1Q16570 336 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 SFXN4Q6P4A7 337 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 FIP1L1Q6UN15 594 aaKnown RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 DND1Q8IYX4 353 aaKnown RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 TMEM99Q8N816 258 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 VSTM2LQ96N03 204 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 C1QTNF6Q9BXI9 259 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 MRPS18BQ9Y676 258 aaKnown RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 A0A0A6YYJ9 748 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 TNFSF11O14788 317 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 TGM6O95932 706 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 OR8G3PP0DMU2 310 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 LIPCP11150 499 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 FCGR2AP12318 317 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 RAB2AP61019 212 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 ECH1Q13011 328 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 CLVS2Q5SYC1 327 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 M1APQ8TC57 530 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 SARGQ9BW04 601 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 C1orf198Q9H425 327 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 NGBQ9NPG2 151 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 IL17BQ9UHF5 180 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 TIAF1O95411 115 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 AMY2AP04746 511 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 ELK1P19419 428 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 ACP1P24666 158 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 RPL27P61353 136 aaKnown RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 FUT7Q11130 342 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 P2RY14Q15391 338 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 MPEG1Q2M385 716 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 KRBOX4Q5JUW0 171 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 TPRA1Q86W33 373 aa9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 MAML2Q8IZL2 1156 aaPredicted RBP9.64□□□□□ -0.87
CARMIL3-202ENST00000559694 A0A087WZY1 265 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 OR5H15A6NDH6 313 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 ZAR1LA6NP61 321 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 NPIPB8E9PQR5 432 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 RBMXL2O75526 392 aaKnown RBP9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 SIX6O95475 246 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 TMEM225BP0DP42 221 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 ARHGDIBP52566 201 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 NUBP1P53384 320 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 SUMO3P55854 103 aaPredicted RBP9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 CLDN20P56880 219 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 RPL18Q07020 188 aaKnown RBP9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF704Q6ZNC4 412 aaPredicted RBP9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF546Q86UE3 836 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 ABRACLQ9P1F3 81 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 FBXL2Q9UKC9 423 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 COA3Q9Y2R0 106 aaPredicted RBP9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 PRAMEF27A3QJZ7 478 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 ANKUB1A6NFN9 424 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 UBL3O95164 117 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 CD34P28906 385 aa9.63□□□□□ -0.87
CARMIL3-202ENST00000559694 EVX1P49640 407 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms