RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 LYPD2Q6UXB3 125 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 DUSP18Q8NEJ0 188 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 MARCH1Q8TCQ1 289 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 PEX13Q92968 403 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 RNF185Q96GF1 192 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 PRRC1Q96M27 445 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 OPALINQ96PE5 141 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 TAAR1Q96RJ0 339 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 MICU1Q9BPX6 476 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 HDHD3Q9BSH5 251 aaPredicted RBP2.95□□□□□ -1.94
CASC4-206ENST00000558847 TEKT3Q9BXF9 490 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 CDC42EP4Q9H3Q1 356 aaKnown RBP2.95□□□□□ -1.94
CASC4-206ENST00000558847 CHRAC1Q9NRG0 131 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 ABCB10Q9NRK6 738 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 OR12D3Q9UGF7 316 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 INSRP06213 1382 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 ASTN1O14525 1302 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 NOTCH2Q04721 2471 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 A0A1B0GTQ1 180 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 A0A1W2PRD5 423 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 CIB4A0PJX0 185 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 NUPL2O15504 423 aaKnown RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 CDC40O60508 579 aaKnown RBP eCLIP2.94□□□□□ -1.94
CASC4-206ENST00000558847 SS18L1O75177 396 aaPredicted RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 HLA-HP01893 362 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 POLR2MP0CAP2 368 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 MDKP21741 143 aaPredicted RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 HOXA9P31269 272 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 LHX2P50458 406 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 NCBP2P52298 156 aaKnown RBP eCLIP2.94□□□□□ -1.94
CASC4-206ENST00000558847 CLDN18P56856 261 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 MXD1Q05195 221 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 REG3AQ06141 175 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 RAD51Q06609 339 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 CKAP4Q07065 602 aaKnown RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 PON3Q15166 354 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 KLHL40Q2TBA0 621 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 LINC00173Q6ZV60 143 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 PCP2Q8IVA1 136 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 APRG1Q8IVJ8 170 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 ARIH2OSQ8N7S6 290 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 TMEM230Q96A57 120 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 NTAN1Q96AB6 310 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 ISG20Q96AZ6 181 aaKnown RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 ECHDC3Q96DC8 303 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 GALNT14Q96FL9 552 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 ZNF799Q96GE5 643 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 C9orf72Q96LT7 481 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 SLC25A2Q9BXI2 301 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 SLC25A39Q9BZJ4 359 aaPredicted RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 IFI27L2Q9H2X8 130 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 CRLF2Q9HC73 371 aa2.94□□□□□ -1.94
CASC4-206ENST00000558847 PEF1Q9UBV8 284 aaKnown RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 F11RQ9Y624 299 aaKnown RBP2.94□□□□□ -1.94
CASC4-206ENST00000558847 IGHV3-74A0A0B4J1X5 117 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 IGHV3-66A0A0C4DH42 116 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 PLAC8L1A1L4L8 177 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 A6NDN8 102 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 RAD51CO43502 376 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 SLC25A14O95258 325 aaPredicted RBP2.93□□□□□ -1.94
CASC4-206ENST00000558847 ARG1P05089 322 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 FABP3P05413 133 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 PSG2P11465 335 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 ARG2P78540 354 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 UBE2SQ16763 222 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 PIP5KL1Q5T9C9 394 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 HES5Q5TA89 166 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 TTC19Q6DKK2 380 aaPredicted RBP2.93□□□□□ -1.94
CASC4-206ENST00000558847 MBOAT1Q6ZNC8 495 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 PRSS58Q8IYP2 241 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 C8orf31Q8N9H6 132 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 OR10J6PQ8NGY7 276 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 GPX8Q8TED1 209 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 GIMAP1Q8WWP7 306 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 EEF1AKMT3Q96AZ1 226 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 DUS3LQ96G46 650 aaKnown RBP2.93□□□□□ -1.94
CASC4-206ENST00000558847 CEP170P1Q96L14 293 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 UCK2Q9BZX2 261 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 LYRM4Q9HD34 91 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 ZNF331Q9NQX6 463 aaPredicted RBP2.93□□□□□ -1.94
CASC4-206ENST00000558847 PTTG3PQ9NZH4 202 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 PDP1Q9P0J1 537 aaPredicted RBP2.93□□□□□ -1.94
CASC4-206ENST00000558847 UVRAGQ9P2Y5 699 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 ZNF282Q9UDV7 671 aaPredicted RBP2.93□□□□□ -1.94
CASC4-206ENST00000558847 TRMT112Q9UI30 125 aaKnown RBP2.93□□□□□ -1.94
CASC4-206ENST00000558847 GTF3C1Q12789 2109 aa2.93□□□□□ -1.94
CASC4-206ENST00000558847 SMKR1H3BMG3 65 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 TRDMT1O14717 391 aaKnown RBP2.92□□□□□ -1.94
CASC4-206ENST00000558847 AQP8O94778 261 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 LSM8O95777 96 aaKnown RBP2.92□□□□□ -1.94
CASC4-206ENST00000558847 IGLV2-23P01705 113 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 HBE1P02100 147 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 HLA-DPB1P04440 258 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 MSR1P21757 451 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 CEACAM6P40199 344 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 RPS10P46783 165 aaKnown RBP2.92□□□□□ -1.94
CASC4-206ENST00000558847 CLDN8P56748 225 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 ERCC8Q13216 396 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 ITIH4Q14624 930 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 ZSCAN26Q16670 478 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms