RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 LRP11Q86VZ4 500 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 ZCCHC24Q8N2G6 241 aaKnown RBP11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 IQCF1Q8N6M8 205 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 NPEPL1Q8NDH3 523 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 IL17RDQ8NFM7 739 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 Q96MF0 132 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 DDOQ99489 341 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 OR2H1Q9GZK4 316 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 MMADHCQ9H3L0 296 aaPredicted RBP11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 MOV10Q9HCE1 1003 aaKnown RBP11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 TBC1D23Q9NUY8 699 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 IGLV1-36A0A0B4J1U3 117 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 IQCMA0A1B0GVH7 501 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 TRIM64A6NGJ6 449 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 TRIM64BA6NI03 449 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 RENP00797 406 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 GSTM3P21266 225 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 POU1F1P28069 291 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 PYCR1P32322 319 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 GUCA1AP43080 201 aaPredicted RBP11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 PLP2Q04941 152 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 SLC36A3Q495N2 470 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 SHEQ5VZ18 495 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 AMIGO2Q86SJ2 522 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 GLB1L2Q8IW92 636 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 SVOPLQ8N434 492 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 NUP37Q8NFH4 326 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 OR52L1Q8NGH7 329 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 OR51L1Q8NGJ5 315 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 TRMT61AQ96FX7 289 aaKnown RBP11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 CDH20Q9HBT6 801 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 TIMM10BQ9Y5J6 103 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
TSPAN3-205ENST00000558745 H3BN98 237 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 EBAG9O00559 213 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 IDH3BO43837 385 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 SSX4O60224 188 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 ENTPD5O75356 428 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 TFP02787 698 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 CD99P14209 185 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 STOMP27105 288 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 APLNRP35414 380 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 GALK2Q01415 458 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 ACSM5Q6NUN0 579 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 CORO6Q6QEF8 472 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 LYPD4Q6UWN0 246 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 DPPA2Q7Z7J5 298 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 SLC37A3Q8NCC5 494 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 OR9Q1Q8NGQ5 310 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 LRTOMTQ8WZ04 291 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 SLC7A6Q92536 515 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 POM121L2Q96KW2 1035 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 SYT3Q9BQG1 590 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 MRPL37Q9BZE1 423 aaKnown RBP11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 GRIP2Q9C0E4 1043 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 YY1AP1Q9H869 796 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 MYEF2Q9P2K5 600 aaKnown RBP11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 ASH2LQ9UBL3 628 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 AP4S1Q9Y587 144 aa11.91□□□□□ -0.5
TSPAN3-205ENST00000558745 C5orf49A4QMS7 147 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 TVP23AA6NH52 213 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 C12orf71A8MTZ7 269 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CIB2O75838 187 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CLPTM1O96005 669 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 GYPBP06028 91 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 GAAP10253 952 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CLUP10909 449 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CRABP1P29762 137 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 GLRXP35754 106 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 WNT5AP41221 380 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CRMP1Q14194 572 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 GINS1Q14691 196 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 KPNB1Q14974 876 aaKnown RBP11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 RAB35Q15286 201 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 TBC1D28Q2M2D7 210 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CCDC92Q53HC0 331 aaPredicted RBP11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 TMEM236Q5W0B7 351 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 RPL13AP3Q6NVV1 102 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 LNX2Q8N448 690 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 DOK1Q99704 481 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 SMR3AQ99954 134 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 VRK1Q99986 396 aaPredicted RBP11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 SEMA6AQ9H2E6 1030 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 PLK3Q9H4B4 646 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 ZNF442Q9H7R0 627 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 MED20Q9H944 212 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 DUSP13Q9UII6 198 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 FBXL3Q9UKT7 428 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 CMAHPQ9Y471 501 aa11.9□□□□□ -0.5
TSPAN3-205ENST00000558745 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
TSPAN3-205ENST00000558745 B9A039 149 aa11.89□□□□□ -0.51
TSPAN3-205ENST00000558745 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
TSPAN3-205ENST00000558745 RER1O15258 196 aa11.89□□□□□ -0.51
TSPAN3-205ENST00000558745 MITFO75030 526 aaPredicted RBP11.89□□□□□ -0.51
TSPAN3-205ENST00000558745 TMCC2O75069 709 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms