RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 MS4A18Q3C1V0 323 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 C1QL3Q5VWW1 255 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ZNF385CQ66K41 422 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 PMS2CLQ68D20 193 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 FAM166AQ6J272 317 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 FAM198BQ6UWH4 519 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ZNF574Q6ZN55 896 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 SLC35D2Q76EJ3 337 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 TMPRSS12Q86WS5 348 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 ELMOD2Q8IZ81 293 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 PRSS35Q8N3Z0 413 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 CCDC54Q8NEL0 328 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 SLC26A10Q8NG04 563 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 OR52I2Q8NH67 350 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 EDAQ92838 391 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ZBTB8AQ96BR9 441 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ABHD17AQ96GS6 310 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 GFM1Q96RP9 751 aaKnown RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 NUDT16L1Q9BRJ7 211 aaKnown RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 ABHD6Q9BV23 337 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 TTTY10Q9BZA0 68 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 SLC25A18Q9H1K4 315 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 C20orf85Q9H1P6 137 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 GALNT9Q9HCQ5 603 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 MRPL22Q9NWU5 206 aaKnown RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 KLHL13Q9P2N7 655 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 MYOTQ9UBF9 498 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 UPB1Q9UBR1 384 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 GPN3Q9UHW5 284 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 PILRBQ9UKJ0 227 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 B3GALT1Q9Y5Z6 326 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 TRAV6A0A075B6T7 132 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 IGHV5-10-1A0A0J9YXX1 117 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 A0A1W2PQ72 361 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 CPED1A4D0V7 1026 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 H7C1C5 153 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 SSNA1O43805 119 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 PRKNO60260 465 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 ZNF780AO75290 641 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 KLK3P07288 261 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 GABRA1P14867 456 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 CTLA4P16410 223 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 IGFBP3P17936 291 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 CSRP1P21291 193 aaKnown RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 IL32P24001 234 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 PRSS3P35030 304 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 SOX2P48431 317 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 DNASE1L1P49184 302 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 DHPSP49366 369 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 EFNA3P52797 238 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 FBXW4P57775 412 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 LCN6P62502 163 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 SLC35A1P78382 337 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 CCL7P80098 99 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 MADCAM1Q13477 382 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 RBMS2Q15434 407 aaKnown RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 FCN2Q15485 313 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 KCNMB1Q16558 191 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 PLPPR5Q32ZL2 321 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 C1orf100Q5SVJ3 147 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 PRAMEF17Q5VTA0 474 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 PEAR1Q5VY43 1037 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 TMEM225Q6GV28 225 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 SLC25A25Q6KCM7 469 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 C3orf33Q6P1S2 294 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 FAM122CQ6P4D5 195 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 POMZP3Q6PJE2 187 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 KLHL24Q6TFL4 600 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 OPN5Q6U736 354 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 LANCL3Q6ZV70 420 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 RFPL4BQ6ZWI9 263 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 SYT9Q86SS6 491 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 GLCCI1Q86VQ1 547 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 PRSS58Q8IYP2 241 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 OR10H5Q8NGA6 315 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 ZNF431Q8TF32 576 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 RNF133Q8WVZ7 376 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 ASB5Q8WWX0 329 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 HSD17B8Q92506 261 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 FAM3DQ96BQ1 224 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 ZNF524Q96C55 264 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 C5orf34Q96MH7 638 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 GPR137Q96N19 417 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 WDR77Q9BQA1 342 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 UQCC2Q9BRT2 126 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 CRB3Q9BUF7 120 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 DEFB126Q9BYW3 111 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 ALX4Q9H161 411 aaPredicted RBP7.45□□□□□ -1.22
SPG11-209ENST00000558253 IRF2BPLQ9H1B7 796 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 METTL7AQ9H8H3 244 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 NOX3Q9HBY0 568 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 KLRF1Q9NZS2 232 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 FBLN5Q9UBX5 448 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 ZNF222Q9UK12 451 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 OR52A1Q9UKL2 312 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 CLEC4AQ9UMR7 237 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 RCE1Q9Y256 329 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 SPEF1Q9Y4P9 236 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 LRP12Q9Y561 859 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms