RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 TEX30Q5JUR7 227 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 SLC18B1Q6NT16 456 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 OR2AK2Q8NG84 335 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 SEH1LQ96EE3 360 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 SLC25A44Q96H78 314 aaPredicted RBP11.57□□□□□ -0.56
LDLR-207ENST00000558013 RADILQ96JH8 1075 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 LINC00052Q96N35 136 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 CMKLR1Q99788 373 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 UTP23Q9BRU9 249 aaKnown RBP11.57□□□□□ -0.56
LDLR-207ENST00000558013 VN1R1Q9GZP7 353 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 POFUT1Q9H488 388 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 EXO5Q9H790 373 aa11.57□□□□□ -0.56
LDLR-207ENST00000558013 LOC100289279A0A1B0GTE1 492 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 TCRBV16S1A1N1A0A5B0 115 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 BLACEA4D250 179 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 ALG1L2C9J202 215 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 IGF2P01344 180 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 IL5P05113 134 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 ARRB1P49407 418 aaPredicted RBP11.56□□□□□ -0.56
LDLR-207ENST00000558013 SORDQ00796 357 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 NR0B2Q15466 257 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 ELAVL1Q15717 326 aaKnown RBP11.56□□□□□ -0.56
LDLR-207ENST00000558013 STEAP1BQ6NZ63 245 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 C11orf88Q6PI97 169 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 RNF144BQ7Z419 303 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 JAGN1Q8N5M9 183 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 TSTD1Q8NFU3 115 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 EMC6Q9BV81 110 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 VDAC3Q9Y277 283 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 A0A1B0GTQ1 180 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 RHPN2P1A8MT19 583 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 SNRPGP15A8MWD9 76 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 PLPP3O14495 311 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 SIGLEC5O15389 551 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 NPIPB7O75200 414 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 CSF2RBP32927 897 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 MNDAP41218 407 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 MAP2K6P52564 334 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 NKPD1Q17RQ9 610 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 FAM166AQ6J272 317 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 GKN2Q86XP6 184 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 RBPMSQ93062 196 aaKnown RBP11.56□□□□□ -0.56
LDLR-207ENST00000558013 MS4A7Q9GZW8 240 aaPredicted RBP11.56□□□□□ -0.56
LDLR-207ENST00000558013 KCNN3Q9UGI6 736 aa11.56□□□□□ -0.56
LDLR-207ENST00000558013 A0A1W2PPC1 479 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 A0A1W2PR77 199 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 TMEM235A6NFC5 223 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 ARL4DP49703 201 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 IKZF1Q13422 519 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 TMUB2Q71RG4 321 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 DCXRQ7Z4W1 244 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 GABRG1Q8N1C3 465 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 ACBD4Q8NC06 268 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 OR6N1Q8NGY5 312 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 PNPLA2Q96AD5 504 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 CCNL2Q96S94 520 aaPredicted RBP11.55□□□□□ -0.56
LDLR-207ENST00000558013 DPYSL5Q9BPU6 564 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 MICU1Q9BPX6 476 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 NUDT22Q9BRQ3 303 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 MRI1Q9BV20 369 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 REG4Q9BYZ8 158 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 CENPMQ9NSP4 180 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 FBXL2Q9UKC9 423 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 WIPF3A6NGB9 483 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 LILRA5A6NI73 299 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 DXOO77932 396 aaKnown RBP11.55□□□□□ -0.56
LDLR-207ENST00000558013 LPLP06858 475 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 NMBP08949 121 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 CSF1P09603 554 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 AKAIN1P0CW23 69 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 PGCP20142 388 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 HTR2CP28335 458 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 MECP2P51608 486 aaKnown RBP11.55□□□□□ -0.56
LDLR-207ENST00000558013 DLX5P56178 289 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 FBXW4P57775 412 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 ARSKQ6UWY0 536 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 IDO2Q6ZQW0 420 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 OR4D6Q8NGJ1 314 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 PELOQ9BRX2 385 aaKnown RBP11.55□□□□□ -0.56
LDLR-207ENST00000558013 EPHA6Q9UF33 1036 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 KCNMB2Q9Y691 235 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 UBE2QL1A1L167 161 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 ADAM10O14672 748 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 ZNF432O94892 652 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 SPDEFO95238 335 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 ANOS1P23352 680 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 S100A11P31949 105 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 GALNSP34059 522 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 SLC6A8P48029 635 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 DHODHQ02127 395 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 TUSC1Q2TAM9 212 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 SCGB2B2Q4G0G5 96 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 CD163Q86VB7 1156 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 CATSPERDQ86XM0 798 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 GALNT11Q8NCW6 608 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 GPX8Q8TED1 209 aa11.55□□□□□ -0.56
LDLR-207ENST00000558013 B3GNT4Q9C0J1 378 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms