RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CLEC2LP0C7M8 214 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 MAPK3P27361 379 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-233ENST00000557529 CALRP27797 417 aaKnown RBP11.06□□□□□ -0.64
SHMT2-233ENST00000557529 SELENOPP49908 381 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF84P51523 738 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
SHMT2-233ENST00000557529 SRYQ05066 204 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 INSL4Q14641 139 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 INAQ16352 499 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 OTPQ5XKR4 325 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 UNQ9370/PRO34162Q6UXP9 181 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 FOXL2NBQ6ZUU3 175 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 CHMP1BQ7LBR1 199 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 LINC00346Q8IVM7 164 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 RNF133Q8WVZ7 376 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 TMEM45BQ96B21 275 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF845Q96IR2 970 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-233ENST00000557529 MAP6Q96JE9 813 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 C4orf45Q96LM5 186 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 KCNS3Q9BQ31 491 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 SCNM1Q9BWG6 230 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 BARHL1Q9BZE3 327 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 ULBP2Q9BZM5 246 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 DEFB127Q9H1M4 99 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 C1orf198Q9H425 327 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 SMURF1Q9HCE7 757 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 POLE4Q9NR33 117 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 FRRS1LQ9P0K9 344 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 UGT2A1Q9Y4X1 527 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 LRP12Q9Y561 859 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 FREM3P0C091 2139 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 OR4C45A6NMZ5 311 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 TAF4O00268 1085 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 DLL1O00548 723 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 TFECO14948 347 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-233ENST00000557529 UCHL1P09936 223 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 H2BFMP0C1H6 154 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 BMP4P12644 408 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 CPN1P15169 458 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF24P17028 368 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 MSR1P21757 451 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 DCTDP32321 178 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 RPS11P62280 158 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHMT2-233ENST00000557529 OR7E24Q6IFN5 339 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 IGFL3Q6UXB1 125 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 RHOUQ7L0Q8 258 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-233ENST00000557529 MFSD4AQ8N468 514 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 HSD17B8Q92506 261 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 SLAMF6Q96DU3 332 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 NELFAQ9H3P2 528 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 RNF122Q9H9V4 155 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 EMC7Q9NPA0 242 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 PARPBPQ9NWS1 579 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 PLEKHB1Q9UF11 243 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-233ENST00000557529 PCDHGA9Q9Y5G4 932 aaKnown RBP11.05□□□□□ -0.64
SHMT2-233ENST00000557529 CSAG2Q9Y5P2 127 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 R4GMQ9 66 aa11.05□□□□□ -0.64
SHMT2-233ENST00000557529 OR6C65A6NJZ3 312 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 IGHG3P01860 377 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 ITGB2P05107 769 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 CDAP32320 146 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 MRPS34P82930 218 aaKnown RBP11.04□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF45Q02386 682 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 Q499Y3 187 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 HSD17B12Q53GQ0 312 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 WDR38Q5JTN6 314 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 RNFT1Q5M7Z0 435 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 PHYHD1Q5SRE7 291 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 RIPPLY2Q5TAB7 128 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 KLHL24Q6TFL4 600 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 SPATC1Q76KD6 591 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 CATSPERDQ86XM0 798 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 GPR137CQ8N3F9 429 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF676Q8N7Q3 588 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 OR13C5Q8NGS8 318 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 GPR148Q8TDV2 347 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 CEP19Q96LK0 163 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 OR14A2Q96R54 314 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 RBM24Q9BX46 236 aaKnown RBP11.04□□□□□ -0.64
SHMT2-233ENST00000557529 PRRG4Q9BZD6 226 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 NIPAL2Q9H841 368 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 CENPMQ9NSP4 180 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 GDF2Q9UK05 429 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-233ENST00000557529 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 LIPGQ9Y5X9 500 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 LHFPL6Q9Y693 200 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 KIAA1549Q9HCM3 1950 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 CFAP54Q96N23 3096 aa11.04□□□□□ -0.64
SHMT2-233ENST00000557529 TRBV5-5A0A0J9YX44 114 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SHISA3A0PJX4 238 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF724A8MTY0 619 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF878C9JN71 531 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 DVL2O14641 736 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 PDCD5O14737 125 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 RGS5O15539 181 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SPINK2P20155 84 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 NPR2P20594 1047 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms