RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FAM27BQ5VT28 67 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 FAM122BQ7Z309 247 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 TGIF2LYQ8IUE0 185 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 GLB1L2Q8IW92 636 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 WDFY1Q8IWB7 410 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 C1orf174Q8IYL3 243 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 CLDN22Q8N7P3 220 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 ATG16L2Q8NAA4 619 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 OR2T33Q8NG76 320 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 OR4C15Q8NGM1 316 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 OR4K13Q8NH42 304 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 SNX18Q96RF0 628 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 BDH2Q9BUT1 245 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 TSSK6Q9BXA6 273 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 CACNG6Q9BXT2 260 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 DGCR6LQ9BY27 220 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 RAB1BQ9H0U4 201 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 SYT4Q9H2B2 425 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 PLK3Q9H4B4 646 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 ZNF442Q9H7R0 627 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 NOX3Q9HBY0 568 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 POLE4Q9NR33 117 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 ZNF701Q9NV72 531 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-223ENST00000557511 VSX1Q9NZR4 365 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-223ENST00000557511 KLHL21Q9UJP4 597 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 NDRG4Q9ULP0 352 aaKnown RBP7.22□□□□□ -1.25
PSEN1-223ENST00000557511 FREM1Q5H8C1 2179 aa7.22□□□□□ -1.25
PSEN1-223ENST00000557511 ARRDC5A6NEK1 342 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 RIIAD1A6NNX1 92 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 MT-ND5P03915 603 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 LCKP06239 509 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 CELA3BP08861 270 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 PAX1P15863 534 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 HIST1H1CP16403 213 aaKnown RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 ZNF823P16415 610 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 ZNF3P17036 446 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 ZNF32P17041 273 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 PAICSP22234 425 aaKnown RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 NR4A1P22736 598 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 FASP25445 335 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 STOMP27105 288 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 POU1F1P28069 291 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 CALCRP30988 508 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 GLRXP35754 106 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 ERFP50548 548 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 DSCR9P59020 149 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 TESK1Q15569 626 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 PABPC1L2AQ5JQF8 200 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 SLC35F1Q5T1Q4 408 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 RGS7BPQ6MZT1 257 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 CLEC2AQ6UVW9 174 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 B3GLCTQ6Y288 498 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 HIPK1Q86Z02 1210 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 ICA1LQ8NDH6 482 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 SDR9C7Q8NEX9 313 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 PROKR2Q8NFJ6 384 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 OR52E2Q8NGJ4 325 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 OR2AJ1Q8NGZ0 328 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 OR2T4Q8NH00 348 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 SNX33Q8WV41 574 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 DNAJC9Q8WXX5 260 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 C11orf40Q8WZ69 217 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 NMD3Q96D46 503 aaKnown RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 PLEKHA8Q96JA3 519 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 RAB3IPQ96QF0 476 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 NMNAT3Q96T66 252 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 GPA33Q99795 319 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 VRK1Q99986 396 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 RHNO1Q9BSD3 238 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 PRRG3Q9BZD7 231 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 BCL2L14Q9BZR8 327 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 NUAK2Q9H093 628 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 EGLN3Q9H6Z9 239 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 ELOVL3Q9HB03 270 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 RPRD1BQ9NQG5 326 aaKnown RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 IL20Q9NYY1 176 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 COA3Q9Y2R0 106 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 AP4S1Q9Y587 144 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 TEX15Q9BXT5 2789 aa7.21□□□□□ -1.26
PSEN1-223ENST00000557511 ANKRD17O75179 2603 aaKnown RBP7.21□□□□□ -1.26
PSEN1-223ENST00000557511 IGKV1D-43A0A0B4J1Z2 117 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 A0A1W2PPW3 197 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 C5orf49A4QMS7 147 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 ZNF503-AS2A6NEH8 195 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 FAM171A2A8MVW0 826 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 H7C417 338 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 OVOL3O00110 214 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 SGCEO43556 437 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 SSX4O60224 188 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 DOK2O60496 412 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 TIPRLO75663 272 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 ALX3O95076 343 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 SOX14O95416 240 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 SNAP29O95721 258 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 HMGN1P05114 100 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 CSF3P09919 207 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 CTLA4P16410 223 aa7.2□□□□□ -1.26
PSEN1-223ENST00000557511 ZNF26P17031 533 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-223ENST00000557511 APEX1P27695 318 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms