RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 GABARAPH6UMI1 98 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 GPR171O14626 319 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 MPIG6BO95866 241 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 PDGFBP01127 241 aaPredicted RBP13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 ITGA5P08648 1049 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 FAM181AQ8N9Y4 354 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 GALNT6Q8NCL4 622 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 CCDC74BQ96LY2 380 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 OR2M2Q96R28 347 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 ZC4H2Q9NQZ6 224 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 OR52A1Q9UKL2 312 aa13.79□□□□□ -0.2
TMEM55B-207ENST00000557041 C13orf42A0A1B0GVH6 325 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 SLC22A23A1A5C7 686 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 C9J4A7 227 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 WNT11O96014 354 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 HTR2CP28335 458 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 HLA-BQ31612 363 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 BTN2A1Q7KYR7 527 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 FAM122BQ7Z309 247 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 FOXRED2Q8IWF2 684 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 CADM4Q8NFZ8 388 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 OR4S1Q8NGB4 309 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 OR4D10Q8NGI6 311 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 ZNF501Q96CX3 271 aaPredicted RBP13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 SLC25A38Q96DW6 304 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 ELF5Q9UKW6 265 aaPredicted RBP13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 UPK3AO75631 287 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 RAB40ALP0C0E4 278 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 GALP22466 123 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 EFNA3P52797 238 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 C19orf57Q0VDD7 668 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 NR0B2Q15466 257 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 SLC22A6Q4U2R8 563 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 STPG1Q5TH74 334 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 AWAT2Q6E213 333 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 BOLLQ8N9W6 283 aaKnown RBP13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 RAB40AQ8WXH6 277 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 OR8B4Q96RC9 309 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 KCNJ15Q99712 375 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 PYCARD-AS1I3L0S3 204 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 IGKV3-11P04433 115 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 SELENOPP49908 381 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 SLC26A5P58743 744 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 NHLRC1Q6VVB1 395 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 PRSS35Q8N3Z0 413 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 D2HGDHQ8N465 521 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 ACTR6Q9GZN1 396 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 RDH8Q9NYR8 311 aa13.78□□□□□ -0.2
TMEM55B-207ENST00000557041 TRAPPC2P0DI81 140 aa13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 TRAPPC2BP0DI82 140 aa13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 AKR1C4P17516 323 aa13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 CCNOP22674 350 aa13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 PTBP1P26599 531 aaKnown RBP eCLIP13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 IGLV3-21P80748 117 aaPredicted RBP13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 MAFAQ8NHW3 353 aaPredicted RBP13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 OR51E1Q8TCB6 317 aa13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 MSANTD3Q96H12 275 aa13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 FOXJ3Q9UPW0 622 aa13.77□□□□□ -0.2
TMEM55B-207ENST00000557041 PLPP3O14495 311 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 HLA-DQB1P01920 261 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 SLC25A1P53007 311 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 CLDN17P56750 224 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 GSG1Q2KHT4 349 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 METTL11BQ5VVY1 283 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 TMEM71Q6P5X7 295 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 FAM57BQ71RH2 274 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 CDC20BQ86Y33 519 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF584Q8IVC4 421 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 BATF2Q8N1L9 274 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 OR4C16Q8NGL9 310 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 GON7Q9BXV9 100 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 SELENOIQ9C0D9 397 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 BANF2Q9H503 90 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 SLC22A11Q9NSA0 550 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 PCDHGA9Q9Y5G4 932 aaKnown RBP13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 ICE1Q9Y2F5 2266 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 METTL21EPA6NDL7 271 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 BGLAPP02818 100 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 CCL4P13236 92 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 DAP3P51398 398 aaKnown RBP13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 MYBPHQ13203 477 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 IL10RAQ13651 578 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 ALKAL2Q6UX46 152 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 ELMOD2Q8IZ81 293 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 MIB2Q96AX9 1013 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 JAM3Q9BX67 310 aa13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 C19orf25Q9UFG5 118 aaPredicted RBP13.77□□□□□ -0.21
TMEM55B-207ENST00000557041 CCSO14618 274 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 LAMTOR5O43504 91 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 MT-ATP6P00846 226 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 KIR3DL2P43630 455 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 CLDN6P56747 220 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 BTG1P62324 171 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 CXADRP78310 365 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 IDO2Q6ZQW0 420 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 ANKRD37Q7Z713 158 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 TCTE3Q8IZS6 198 aa13.76□□□□□ -0.21
TMEM55B-207ENST00000557041 SLC39A7Q92504 469 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms