RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 ITGA5P08648 1049 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 ANOS1P23352 680 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 CDAP32320 146 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 FOLR3P41439 243 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 TAS2R20P59543 309 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 RRAS2P62070 204 aaPredicted RBP9.02□□□□□ -0.97
TMEM260-211ENST00000556648 MFAP5Q13361 173 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 EXT1Q16394 746 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 PCK2Q16822 640 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 TMEM69Q5SWH9 247 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 KCTD18Q6PI47 426 aaPredicted RBP9.02□□□□□ -0.97
TMEM260-211ENST00000556648 CFAP77Q6ZQR2 320 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 ZNF227Q86WZ6 799 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 EGFL6Q8IUX8 553 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 UEVLDQ8IX04 471 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 ZNF454Q8N9F8 522 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 PLPP7Q8NBV4 271 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 NOXO1Q8NFA2 376 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 OR51D1Q8NGF3 324 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 OR51A2Q8NGJ7 313 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 ASB5Q8WWX0 329 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 MIB2Q96AX9 1013 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 HAVCR1Q96D42 359 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 JSRP1Q96MG2 331 aaPredicted RBP9.02□□□□□ -0.97
TMEM260-211ENST00000556648 CMTM3Q96MX0 182 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 MRPL13Q9BYD1 178 aaKnown RBP9.02□□□□□ -0.97
TMEM260-211ENST00000556648 DPAGT1Q9H3H5 408 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 FANCFQ9NPI8 374 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 CENPMQ9NSP4 180 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 STEAP1Q9UHE8 339 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 DHDHQ9UQ10 334 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 LOC107986453A0A1B0GWG9 222 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 FAM47E-STBD1D6RA91 191 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 P2RY10O00398 339 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 TP53I11O14683 189 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 STK17BO94768 372 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 KDM4BO94953 1096 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 TCRBP04435 133 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 PGA4P0DJD7 388 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 PGA3P0DJD8 388 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 ACP1P24666 158 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 MPLP40238 635 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 SSR4P51571 173 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 MAP2K6P52564 334 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 ART1P52961 327 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 Q0VFX4 171 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 HACD4Q5VWC8 232 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 FAM205BPQ63HN1 556 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 TMEM225Q6GV28 225 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 FAAP20Q6NZ36 180 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 PPP1R32Q7Z5V6 425 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 PLCZ1Q86YW0 608 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 M1APQ8TC57 530 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 GNRHR2Q96P88 292 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 PLEKHA1Q9HB21 404 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 BEX1Q9HBH7 125 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 MOV10Q9HCE1 1003 aaKnown RBP9.02□□□□□ -0.97
TMEM260-211ENST00000556648 SH2D2AQ9NP31 389 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 KLK11Q9UBX7 282 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 OR52A1Q9UKL2 312 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 LOXL2Q9Y4K0 774 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 WDR87Q6ZQQ6 2873 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 NSG1A0A0A6YYJ2 146 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 IGHV3-15A0A0B4J1V0 119 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 M0R296 226 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 AQP8O94778 261 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 LIFP15018 202 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 OTX2P32243 289 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 POU3F4P49335 361 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 CLRN1P58418 232 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 BTG1P62324 171 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 FCN2Q15485 313 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 HYAL4Q2M3T9 481 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 Q5BKY6 102 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 B3GNTL1Q67FW5 361 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-211ENST00000556648 LRFN4Q6PJG9 635 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 TIPARPQ7Z3E1 657 aaKnown RBP9.01□□□□□ -0.97
TMEM260-211ENST00000556648 NOXA1Q86UR1 476 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 ADPRHL1Q8NDY3 354 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 OR13C3Q8NGS6 347 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 AKAP1Q92667 903 aaKnown RBP eCLIP9.01□□□□□ -0.97
TMEM260-211ENST00000556648 SLAMF6Q96DU3 332 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 CACNG6Q9BXT2 260 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 OR2B2Q9GZK3 357 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 HRASLSQ9HDD0 168 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 CGGBP1Q9UFW8 167 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-211ENST00000556648 ETV7Q9Y603 341 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 LHFPL6Q9Y693 200 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 ZDBF2Q9HCK1 2354 aa9.01□□□□□ -0.97
TMEM260-211ENST00000556648 A0A1W2PQ72 361 aa9□□□□□ -0.97
TMEM260-211ENST00000556648 A6NL46 340 aa9□□□□□ -0.97
TMEM260-211ENST00000556648 AQP7P3A6NL99 342 aa9□□□□□ -0.97
TMEM260-211ENST00000556648 CENPXA8MT69 81 aa9□□□□□ -0.97
TMEM260-211ENST00000556648 CENPBD1B2RD01 187 aa9□□□□□ -0.97
TMEM260-211ENST00000556648 GABARAPH6UMI1 98 aa9□□□□□ -0.97
TMEM260-211ENST00000556648 KRT33AO76009 404 aa9□□□□□ -0.97
TMEM260-211ENST00000556648 GLSO94925 669 aaPredicted RBP9□□□□□ -0.97
TMEM260-211ENST00000556648 H2BFMP0C1H6 154 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms