RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 ALDH3B1P43353 468 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 GPR6P46095 362 aaPredicted RBP6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 KLF3P57682 345 aaPredicted RBP6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 CTXN1P60606 82 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 SGCAQ16586 387 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 FXNQ16595 210 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 HIST3H3Q16695 136 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 C10orf128Q5T292 105 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 FAM205BPQ63HN1 556 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 C8orf82Q6P1X6 216 aaPredicted RBP6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 FDX2Q6P4F2 183 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 TMEM154Q6P9G4 183 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 CYP4Z1Q86W10 505 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 MOSPD2Q8NHP6 518 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 SPATA3Q8NHX4 192 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 FGFBP3Q8TAT2 258 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 SYNPRQ8TBG9 265 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 LIPHQ8WWY8 451 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 GEMIN6Q8WXD5 167 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 C11orf40Q8WZ69 217 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 RDH5Q92781 318 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 BPIFA2Q96DR5 249 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 FANCD2OSQ96PS1 177 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 MRPL13Q9BYD1 178 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 BCL2L14Q9BZR8 327 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 TXNIPQ9H3M7 391 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 SIAEQ9HAT2 523 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 SMURF2Q9HAU4 748 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 C20orf141Q9NUB4 165 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 TAAR3PQ9P1P4 343 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 EIF3KQ9UBQ5 218 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 ABCA1O95477 2261 aa6.61□□□□□ -1.35
HNRNPC-226ENST00000556628 CSPG4Q6UVK1 2322 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 LRP5LA4QPB2 252 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 A6NIZ1 184 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 EFCAB9A8MZ26 197 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 LYNX1G3V0Z9 82 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 CXCR6O00574 342 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 TPD52L2O43399 206 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 PIP5K1CO60331 668 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SLC2A10O95528 541 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SNAP29O95721 258 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 TSPAN19P0C672 248 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 LYNX1P0DP58 116 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 CCL2P13500 99 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ACHEP22303 614 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 CCNOP22674 350 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 IGFBP5P24593 272 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 GCH1P30793 250 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 YAP1P46937 504 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SLC9A3P48764 834 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 GDI2P50395 445 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SLC7A2P52569 658 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 UCP2P55851 309 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 RAP1BP61224 184 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 RPL27P61353 136 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 RAP1AP62834 184 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 MRPS34P82930 218 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 TEKQ02763 1124 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 LIPEQ05469 1076 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SLC34A1Q06495 639 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 TRAP1Q12931 704 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 FLOT2Q14254 428 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 TRIM25Q14258 630 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 MAD2L1BPQ15013 274 aaPredicted RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ANKDD1AQ495B1 522 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 IFI44LQ53G44 452 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 FAM120AOSQ5T036 256 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 THEM4Q5T1C6 240 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ARMC4Q5T2S8 1044 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ZNF730Q6ZMV8 503 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 OAFQ86UD1 273 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 LRP11Q86VZ4 500 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ZNF584Q8IVC4 421 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SLC15A3Q8IY34 581 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 RNF113BQ8IZP6 322 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 OFCC1Q8IZS5 231 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ARIH2OSQ8N7S6 290 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 LINC01356Q8N9X3 169 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 OR1J1Q8NGS3 322 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ZNF519Q8TB69 540 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 NSMAFQ92636 917 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 FAM162AQ96A26 154 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 CCDC124Q96CT7 223 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ASB9Q96DX5 294 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SNX18Q96RF0 628 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ZNF416Q9BWM5 594 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 OR51B6Q9H340 312 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 MUC13Q9H3R2 512 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 CMTM6Q9NX76 183 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 SLCO1C1Q9NYB5 712 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 RHCGQ9UBD6 479 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 ABCD2Q9UBJ2 740 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 RPS6KA6Q9UK32 745 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 FZR1Q9UM11 496 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 A4GNTQ9UNA3 340 aa6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 FAM32AQ9Y421 112 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-226ENST00000556628 A0A1W2PPL8 197 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms