RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TMEM231Q9H6L2 316 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 WDR76Q9H967 626 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ACTR8Q9H981 624 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ROPN1Q9HAT0 212 aaPredicted RBP2.61□□□□□ -1.99
SRP54-209ENST00000555746 IL1RL2Q9HB29 575 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 FOLH1BQ9HBA9 442 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ZNF160Q9HCG1 818 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 AMBNQ9NP70 447 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ADAP2Q9NPF8 381 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 DIABLOQ9NR28 239 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ABCB10Q9NRK6 738 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 TREX1Q9NSU2 369 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 CMTM6Q9NX76 183 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 SLC2A8Q9NY64 477 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 MTCH1Q9NZJ7 389 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 CD274Q9NZQ7 290 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 NYAP2Q9P242 653 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 SEC14L4Q9UDX3 406 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 MIOXQ9UGB7 285 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ABCG2Q9UNQ0 655 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 GINS2Q9Y248 185 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 PRG3Q9Y2Y8 225 aaPredicted RBP2.61□□□□□ -1.99
SRP54-209ENST00000555746 RHBDD3Q9Y3P4 386 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ZNF175Q9Y473 711 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 HYOU1Q9Y4L1 999 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 MMP24Q9Y5R2 645 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 SLCO1B1Q9Y6L6 691 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 SF3B1O75533 1304 aaKnown RBP eCLIP2.61□□□□□ -1.99
SRP54-209ENST00000555746 CUBNO60494 3623 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 ABCA4P78363 2273 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 DOCK9Q9BZ29 2069 aa2.61□□□□□ -1.99
SRP54-209ENST00000555746 PDCD11Q14690 1871 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 HELZP42694 1942 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 DCHS2Q6V1P9 2916 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 CROCCQ5TZA2 2017 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NPIPA5A0A0B4J1W7 369 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 GNG14A0A1W2PPG7 69 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ERI2A8K979 691 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 C9JVG2 144 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NPIPA5E9PKD4 350 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 CYB561D2O14569 222 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 BCKDKO14874 412 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 BET1O15155 118 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 KDELR3O43731 214 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 LCMT2O60294 686 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 FCMRO60667 390 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 PFDN1O60925 122 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 STK17BO94768 372 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 F10P00742 488 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 OAS1P00973 400 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 IGHG3P01860 377 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SNRPCP09234 159 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 CTXN2P0C2S0 81 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 GSTT2P0CG29 244 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 GSTT2BP0CG30 244 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 GP9P14770 177 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ZNF44P15621 663 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TNNI1P19237 187 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 CALML3P27482 149 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 HTR2AP28223 471 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 HSD11B1P28845 292 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 PRDX6P30041 224 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SERPINB1P30740 379 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 MATKP42679 507 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SLC1A2P43004 574 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ALDH3B2P48448 385 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 RGS4P49798 205 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TAF6P49848 677 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 EMP2P54851 167 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 CDH4P55283 916 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 RPL10AP62906 217 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 CDH17Q12864 832 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TSPAN31Q12999 210 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SMCO1Q147U7 214 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TMED2Q15363 201 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SLC1A5Q15758 541 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 CARTPTQ16568 116 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ACSF3Q4G176 576 aaPredicted RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 CMPK2Q5EBM0 449 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NHLRC3Q5JS37 347 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TEX30Q5JUR7 227 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 BRMS1LQ5PSV4 323 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 RABGAP1LQ5R372 815 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 BEND3Q5T5X7 828 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 C6orf183Q5T699 404 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 RNLSQ5VYX0 342 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 DUPD1Q68J44 220 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 FAM151BQ6UXP7 276 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 DPY19L2P2Q6ZN68 376 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 C3orf62Q6ZUJ4 267 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TMEM26Q6ZUK4 368 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SLC35D2Q76EJ3 337 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SSX9Q7RTT3 188 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 C16orf62Q7Z3J2 963 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 RANBP3LQ86VV4 465 aaPredicted RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 MARCH9Q86YJ5 346 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 HIPK1Q86Z02 1210 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 GID4Q8IVV7 300 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 LRRC75A-AS1Q8N1F1 130 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NATD1Q8N6N6 113 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms