RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TCF21O43680 179 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 H1F0P07305 194 aaKnown RBP13.17□□□□□ -0.3
SNX6-205ENST00000555648 CD14P08571 375 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 GAAP10253 952 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 LIPAP38571 399 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 PPP1CBP62140 327 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 MVKQ03426 396 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 SCRN3Q0VDG4 424 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 KRT72Q14CN4 511 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 KRTAP24-1Q3LI83 254 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 ZMAT1Q5H9K5 638 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 FAM209AQ5JX71 171 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 AVPI1Q5T686 147 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 TBPL2Q6SJ96 375 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 SLC25A40Q8TBP6 338 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 RAB1CQ92928 201 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 ZNF570Q96NI8 536 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 WACQ9BTA9 647 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 C19orf24Q9BVV8 132 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 WNT5BQ9H1J7 359 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 RERGLQ9H628 205 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 NMNAT1Q9HAN9 279 aaPredicted RBP13.17□□□□□ -0.3
SNX6-205ENST00000555648 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 ENPP4Q9Y6X5 453 aa13.17□□□□□ -0.3
SNX6-205ENST00000555648 LOC100509620A0A075B734 347 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 H7C1C5 153 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 AHCYL1O43865 530 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 RP2O75695 350 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 ABHD16AO95870 558 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 NCK1P16333 377 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 GSTM3P21266 225 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 WNT5AP41221 380 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 CRYBB2P43320 205 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 PSME3P61289 254 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 LCN6P62502 163 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 SLC3A1Q07837 685 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 ZNF774Q6NX45 483 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 ZER1Q7Z7L7 766 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 SYT9Q86SS6 491 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 PEG10Q86TG7 708 aaKnown RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 ZNF101Q8IZC7 436 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 KLF14Q8TD94 323 aaPredicted RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 IPCEF1Q8WWN9 437 aaPredicted RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 CCL17Q92583 94 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 LRRC37BQ96QE4 947 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 ELAC2Q9BQ52 826 aaKnown RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 OR2J1Q9GZK6 312 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 NSRP1Q9H0G5 558 aaKnown RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 RACGAP1Q9H0H5 632 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 SPAG4Q9NPE6 437 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 POLE4Q9NR33 117 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 ADA2Q9NZK5 511 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 CGGBP1Q9UFW8 167 aaPredicted RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 SAMD4AQ9UPU9 718 aaKnown RBP13.16□□□□□ -0.3
SNX6-205ENST00000555648 AURKCQ9UQB9 309 aa13.16□□□□□ -0.3
SNX6-205ENST00000555648 TRAV20A0A0B4J274 112 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 FAM157AC9JC47 383 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 H3BSA7 217 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 TIMM8AO60220 97 aaPredicted RBP13.15□□□□□ -0.3
SNX6-205ENST00000555648 DOK2O60496 412 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 NDUFB2O95178 105 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 MPV17P39210 176 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 HTR5AP47898 357 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
SNX6-205ENST00000555648 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 GLYATQ6IB77 296 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 ACSM5Q6NUN0 579 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 FAHD2BQ6P2I3 314 aaPredicted RBP13.15□□□□□ -0.3
SNX6-205ENST00000555648 TREML1Q86YW5 311 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
SNX6-205ENST00000555648 FAHD2AQ96GK7 314 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 MARS2Q96GW9 593 aaKnown RBP13.15□□□□□ -0.3
SNX6-205ENST00000555648 FAM46AQ96IP4 442 aaKnown RBP13.15□□□□□ -0.3
SNX6-205ENST00000555648 Q96M85 177 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 DIRC2Q96SL1 478 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 METTL17Q9H7H0 456 aaPredicted RBP13.15□□□□□ -0.3
SNX6-205ENST00000555648 ZNF665Q9H7R5 613 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 EMC7Q9NPA0 242 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 EGFL7Q9UHF1 273 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 ADAM18Q9Y3Q7 739 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 COL6A5A8TX70 2615 aa13.15□□□□□ -0.3
SNX6-205ENST00000555648 TEX13CA0A0J9YWL9 993 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 A0A1W2PRQ8 180 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 ISPDA4D126 451 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 PRSS37A4D1T9 235 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 WNT9BO14905 357 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 KHDRBS3O75525 346 aaKnown RBP13.14□□□□□ -0.31
SNX6-205ENST00000555648 IGHV1-46P01743 117 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 ITGA2P17301 1181 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 RHCEP18577 417 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 FUT4P22083 530 aa13.14□□□□□ -0.31
SNX6-205ENST00000555648 TNFSF4P23510 183 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms