RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 LUZP2Q86TE4 346 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 ZNF100Q8IYN0 542 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 ZNF485Q8NCK3 441 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 SPRYD4Q8WW59 207 aaPredicted RBP9.46□□□□□ -0.9
TDP1-211ENST00000555178 POLE4Q9NR33 117 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 EXOSC1Q9Y3B2 195 aaKnown RBP9.46□□□□□ -0.9
TDP1-211ENST00000555178 GRIP1Q9Y3R0 1128 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 LHFPL6Q9Y693 200 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 IRGMA1A4Y4 181 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 CENPBD1B2RD01 187 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 E9PI62 339 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 E9PLN8 166 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 KRT33AO76009 404 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 IL2RAP01589 272 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 ITGA5P08648 1049 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 OR2T7P0C7T2 308 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
TDP1-211ENST00000555178 UBE2UQ5VVX9 321 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 ZNF322Q6U7Q0 402 aaPredicted RBP9.45□□□□□ -0.9
TDP1-211ENST00000555178 C22orf34Q6ZV56 151 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 SVOPQ8N4V2 548 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 OR2T27Q8NH04 317 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 OTOSQ8NHW6 89 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 THEM6Q8WUY1 208 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 CCDC120Q96HB5 630 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 C4orf36Q96KX1 117 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 SH3GL3Q99963 347 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 VKORC1Q9BQB6 163 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 ZNF416Q9BWM5 594 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 MND1Q9BWT6 205 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 JAM3Q9BX67 310 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 NELFAQ9H3P2 528 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 ACOXLQ9NUZ1 547 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 ASH2LQ9UBL3 628 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 LAMP5Q9UJQ1 280 aa9.45□□□□□ -0.9
TDP1-211ENST00000555178 A0A096LPE4 126 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 A0A1W2PPZ6 126 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ZNF99A8MXY4 864 aaPredicted RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 J3QLW9 94 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 IL18BPO95998 194 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 OR8G3PP0DMU2 310 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ZNF823P16415 610 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ZNF19P17023 458 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ALOX5APP20292 161 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 IGHV1-2P23083 117 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 PTGER4P35408 488 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 LIPAP38571 399 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 EIF2B1Q14232 305 aaKnown RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 GALEQ14376 348 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 KLHL24Q6TFL4 600 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 CFAP77Q6ZQR2 320 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 DCXRQ7Z4W1 244 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 RORBQ92753 470 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 MAP6Q96JE9 813 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 OPALINQ96PE5 141 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 NAA50Q9GZZ1 169 aaKnown RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 PLSCR4Q9NRQ2 329 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 PARPBPQ9NWS1 579 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 A0A1W2PR80 420 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 TMEM129A0AVI4 362 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 RER1O15258 196 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 LYZL6O75951 148 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 JUNBP17275 347 aaPredicted RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 NR4A1P22736 598 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 CTSSP25774 331 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 WNT4P56705 351 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ACTC1P68032 377 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ACTA1P68133 377 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 TUBA1BP68363 451 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ARF1P84077 181 aaKnown RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 SNTB1Q13884 538 aaKnown RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 ENDOGQ14249 297 aaKnown RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 SPHARQ15513 63 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 TIGD6Q17RP2 521 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 RIPPLY2Q5TAB7 128 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 RNLSQ5VYX0 342 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 OR2A2Q6IF42 318 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 LRRN1Q6UXK5 716 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 FOXL2NBQ6ZUU3 175 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 TUBA1AQ71U36 451 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 KLBQ86Z14 1044 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 KLHL36Q8N4N3 616 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 GALNT11Q8NCW6 608 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 OR10S1Q8NGN2 331 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 FNDC8Q8TC99 324 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ST7LQ8TDW4 575 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 HSD17B8Q92506 261 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 FOXB1Q99853 325 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 ABHD6Q9BV23 337 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 LINC00470Q9BZP3 86 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 GP6Q9HCN6 339 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 TMEM38BQ9NVV0 291 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 CHCHD3Q9NX63 227 aaKnown RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 SLCO1C1Q9NYB5 712 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 UPB1Q9UBR1 384 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 CYB5R1Q9UHQ9 305 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 MRM2Q9UI43 246 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms