RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ASS1P00966 412 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TNFP01375 233 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 APOEP02649 317 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RHOCP08134 193 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 STSP08842 583 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 KRTAP1-4P0C5Y4 121 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DNAH10OSP0CZ25 163 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PGCP20142 388 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TPSB2P20231 275 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PTMSP20962 102 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 NT5EP21589 574 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TBXA2RP21731 343 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CALB2P22676 271 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PSMA5P28066 241 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR1E1P30953 314 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CHI3L1P36222 383 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 GCLMP48507 274 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 EFNA3P52797 238 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 KRTAP10-1P60331 282 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RPS15P62841 145 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ARG2P78540 354 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 GTF2BQ00403 316 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DEFA6Q01524 100 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OTUD4Q01804 1114 aaKnown RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 LAGE3Q14657 143 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 TPSAB1Q15661 275 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF630Q2M218 657 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CCDC14Q49A88 953 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR2B11Q5JQS5 317 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SYPL2Q5VXT5 272 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 GALNT17Q6IS24 598 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SLC25A24Q6NUK1 477 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CES3Q6UWW8 571 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 KIAA1328Q86T90 577 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 BIVMQ86UB2 503 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 C11orf53Q8IXP5 236 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 LINC01561Q8N1V8 128 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ZADH2Q8N4Q0 377 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 C15orf54Q8N8G6 183 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DNAAF3Q8N9W5 541 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 FAM184AQ8NB25 1140 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ST6GALNAC3Q8NDV1 305 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DENND6BQ8NEG7 585 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR4D9Q8NGE8 314 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OSTF1Q92882 214 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 RAB7BQ96AH8 199 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SLC25A38Q96DW6 304 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 C12orf66Q96MD2 445 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 SMIM14Q96QK8 99 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 NRTNQ99748 197 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CITED1Q99966 193 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 MAPKAP1Q9BPZ7 522 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DDA1Q9BW61 102 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 HES7Q9BYE0 225 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PLA2G12AQ9BZM1 189 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 BLZF1Q9H2G9 400 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 MEAF6Q9HAF1 191 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 POPDC2Q9HBU9 364 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 ACP6Q9NPH0 428 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 DDIT4Q9NX09 232 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 AIPL1Q9NZN9 384 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OR1A1Q9P1Q5 309 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 GNG12Q9UBI6 72 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 B4GALT7Q9UBV7 327 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 WDR45Q9Y484 360 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 OARD1Q9Y530 152 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PCYT1BQ9Y5K3 369 aaPredicted RBP1.1□□□□□ -2.23
PRPF39-208ENST00000554785 FADS3Q9Y5Q0 445 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 CPAMD8Q8IZJ3 1885 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 PRR14LQ5THK1 2151 aa1.1□□□□□ -2.23
PRPF39-208ENST00000554785 IGHV5-51A0A0C4DH38 117 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 LOC100131303A0A0U1RQF7 123 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 A0A1B0GUH1 482 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 A0A1W2PNV4 684 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 PDZK1P1A8MUH7 402 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 H0YCG3 227 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 TMX2-CTNND1H3BSU7 103 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 XPO1O14980 1071 aaKnown RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 SPAG6O75602 509 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 CCNB1P14635 433 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 FOLR1P15328 257 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 RPA2P15927 270 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ABOP16442 354 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 VDAC1P21796 283 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 PAX7P23759 505 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ZBTB25P24278 435 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 PBLDP30039 288 aaPredicted RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 OR3A4PP47883 348 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 STARP49675 285 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 AP3M2P53677 418 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 HSD17B7P56937 341 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 OC90Q02509 493 aaPredicted RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 BCL2L1Q07817 233 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 CYP24A1Q07973 514 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 DMTNQ08495 405 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 RAB40BQ12829 278 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ART3Q13508 389 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 SELPLGQ14242 412 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 SYPL1Q16563 259 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 PDK4Q16654 411 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms