RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 P2RY8Q86VZ1 359 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 KCNMB4Q86W47 210 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SLC26A11Q86WA9 606 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM173Q86WV6 379 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CALHM1Q8IU99 346 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MFSD6LQ8IWD5 586 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MMP21Q8N119 569 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF843Q8N446 348 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 NECAP1Q8NC96 275 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 DUSP18Q8NEJ0 188 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 DEFB124Q8NES8 71 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CSNK2A3Q8NEV1 391 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PXT1Q8NFP0 134 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OR13C5Q8NGS8 318 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OR2G2Q8NGZ5 317 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OR4S2Q8NH73 311 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 COQ8AQ8NI60 647 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SUN3Q8TAQ9 357 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 THAP6Q8TBB0 222 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 FBXO25Q8TCJ0 367 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SPPL2BQ8TCT7 592 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 NPRL2Q8WTW4 380 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 TAAR8Q969N4 342 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 YIPF6Q96EC8 236 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ZBED6CLQ96FA7 236 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 EEF2KMTQ96G04 330 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SLC41A3Q96GZ6 507 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SMIM10Q96HG1 83 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 C3orf30Q96M34 536 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 NEDD4LQ96PU5 975 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 RNF157Q96PX1 679 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ACCSQ96QU6 501 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OR2M2Q96R28 347 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 OR8B4Q96RC9 309 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF300Q96RE9 604 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ABHD1Q96SE0 405 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CPXM1Q96SM3 734 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PIMREGQ9BSJ6 248 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 NAA11Q9BSU3 229 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ALKBH7Q9BT30 221 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 H2AFJQ9BTM1 129 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 RPP25Q9BUL9 199 aaKnown RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 COLEC11Q9BWP8 271 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SUCNR1Q9BXA5 334 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 DPH1Q9BZG8 443 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CIPCQ9C0C6 399 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 FAM49AQ9H0Q0 323 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SLC25A32Q9H2D1 315 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CPVLQ9H3G5 476 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM185BQ9H7F4 350 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 TUBA4BQ9H853 241 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 FN3KRPQ9HA64 309 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 C3orf14Q9HBI5 128 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 DNAJC4Q9NNZ3 241 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ASAH2Q9NR71 780 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 PXMP2Q9NR77 195 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 SMCO4Q9NRQ5 59 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 AGPAT4Q9NRZ5 378 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CUTCQ9NTM9 273 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MTCH1Q9NZJ7 389 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ADA2Q9NZK5 511 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 MARCH4Q9P2E8 410 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 DNAJB11Q9UBS4 358 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 COPS7AQ9UBW8 275 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 IKZF3Q9UKT9 509 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 CARHSP1Q9Y2V2 147 aaKnown RBP3.96□□□□□ -1.78
ATXN3-227ENST00000554491 COQ4Q9Y3A0 265 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 KLK4Q9Y5K2 254 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ARL5AQ9Y689 179 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 LAMA1P25391 3075 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ABCA12Q86UK0 2595 aa3.96□□□□□ -1.78
ATXN3-227ENST00000554491 ATG2BQ96BY7 2078 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 A0A096LPI6 279 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 TRBV7-9A0A0J9YWB2 115 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 A0A1W2PQ09 198 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 TCRBV5S1A1TA0A578 114 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 HYKKA2RU49 373 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CPED1A4D0V7 1026 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 TRAPPC13A5PLN9 417 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR6C68A6NDL8 312 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SDR42E2A6NKP2 422 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SHISA7A6NL88 538 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR11H12B2RN74 326 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 GOSR2O14653 212 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 BCKDKO14874 412 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 FABP7O15540 132 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CDC40O60508 579 aaKnown RBP eCLIP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CA11O75493 328 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ADAP1O75689 374 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 TNFSF15O95150 251 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 BRI3O95415 125 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 HPP00738 406 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 HPRP00739 348 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 PDYNP01213 254 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 IFNA5P01569 189 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 TCRBP04435 133 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ANXA3P12429 323 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CYP4B1P13584 511 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 RPA2P15927 270 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF14P17017 642 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms