RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZNF426Q9BUY5 554 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ASPNQ9BXN1 380 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SLC29A3Q9BZD2 475 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 C20orf27Q9GZN8 174 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ESRP2Q9H6T0 727 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MYNNQ9NPC7 610 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 LHX9Q9NQ69 397 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 NLE1Q9NVX2 485 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SMOXQ9NWM0 555 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM9Q9P0T7 183 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PPP4R1LQ9P1A2 415 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PDE10AQ9Y233 779 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MRPS18CQ9Y3D5 142 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MMP24Q9Y5R2 645 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 AUP1Q9Y679 476 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CNTRLQ7Z7A1 2325 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SMG1Q96Q15 3661 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 KNL1Q8NG31 2342 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 NCOA6Q14686 2063 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ANKRD12Q6UB98 2062 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 hCG_38984A0A1B0GV85 526 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 A0A1W2PNR3 127 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 FAM90A10PA6NDY2 464 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CXorf49A8MYA2 514 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 H3BMH7 237 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 XPNPEP2O43895 674 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 FZD7O75084 574 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RAD51DO75771 328 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR2J2O76002 312 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CLIC3O95833 236 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TFP02787 698 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ALDOBP05062 364 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SMIM10L1P0DMW3 83 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SERPINA2P20848 420 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 EPHA1P21709 976 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MMP11P24347 488 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 GCAP28676 217 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PCSK6P29122 969 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SPINT3P49223 89 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TAS2R41P59536 307 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RPL15P61313 204 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 STXBP1P61764 594 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RPL19P84098 196 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 HHEXQ03014 270 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TFDP2Q14188 446 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SIX1Q15475 284 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TESK1Q15569 626 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 EFNB3Q15768 340 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RBBP7Q16576 425 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 DUSP7Q16829 419 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 GGTA1PQ4G0N0 100 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF658BQ4V348 819 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 AGKQ53H12 422 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SFT2D3Q587I9 215 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 GCSAMLQ5JQS6 135 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SYT6Q5T7P8 510 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RWDD4Q6NW29 188 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 BTNL8Q6UX41 500 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RPS27LQ71UM5 84 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ASRGL1Q7L266 308 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 DET1Q7L5Y6 550 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 DPY19L4Q7Z388 723 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 KLHDC8BQ8IXV7 354 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM132CQ8N3T6 1108 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RYBPQ8N488 228 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RBMXL3Q8N7X1 1067 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 WDSUB1Q8N9V3 476 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ZSCAN4Q8NAM6 433 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 C2CD4AQ8NCU7 369 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PXT1Q8NFP0 134 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR6K2Q8NGY2 324 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR52E5Q8NH55 327 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR52I2Q8NH67 350 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ARRDC2Q8TBH0 407 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ABHD3Q8WU67 409 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CT55Q8WUE5 264 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 APH1BQ8WW43 257 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 UFD1Q92890 307 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SMIM10Q96HG1 83 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TRIB3Q96RU7 358 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PEBP4Q96S96 227 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 NPAS1Q99742 590 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PTDSS2Q9BVG9 487 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 DCLRE1BQ9H816 532 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CCDC59Q9P031 241 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SEC14L4Q9UDX3 406 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 KLHL21Q9UJP4 597 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CELSR3Q9NYQ7 3312 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TGIF2-C20orf24A0A0A6YYL0 155 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SHISA3A0PJX4 238 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 C9orf170A2RU37 121 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR2W5A6NFC9 320 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 CASKO14936 926 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SLC22A1O15245 554 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 KHDRBS3O75525 346 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SLC25A12O75746 678 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 RGS11O94810 467 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ETHE1O95571 254 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ESRRBO95718 433 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 APRTP07741 180 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms