RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 SLC37A3Q8NCC5 494 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 NPEPL1Q8NDH3 523 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 OR4K13Q8NH42 304 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 RHOXF1Q8NHV9 184 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 APH1BQ8WW43 257 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 HDAC2Q92769 488 aaKnown RBP12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 APH1AQ96BI3 265 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 EMC6Q9BV81 110 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 ASB6Q9NWX5 421 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 TMEM160Q9NX00 188 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC25A15Q9Y619 301 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 ATP23Q9Y6H3 246 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 CADP27708 2225 aa12.2□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC35F4A4IF30 521 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 WBP4O75554 376 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 TRMUO75648 421 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 BCL10O95999 233 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 IGHV4-31P0DP07 118 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 DAP3P51398 398 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 CLDN17P56750 224 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 CDC42P60953 191 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 SNRPGP62308 76 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 CD47Q08722 323 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 DBPQ10586 325 aaPredicted RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 CRMP1Q14194 572 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 MAD2L1BPQ15013 274 aaPredicted RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 SNAPC1Q16533 368 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 TMEM123Q8N131 208 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 SDR9C7Q8NEX9 313 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 OR52E2Q8NGJ4 325 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 OR6X1Q8NH79 312 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 TMEM163Q8TC26 289 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 C10orf105Q8TEF2 133 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 NMD3Q96D46 503 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC38A2Q96QD8 506 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 OR2M2Q96R28 347 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 IL4I1Q96RQ9 567 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 MRPL13Q9BYD1 178 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 NMNAT2Q9BZQ4 307 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 HINT3Q9NQE9 182 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 TAS2R16Q9NYV7 291 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 UBAP1Q9NZ09 502 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 GRHPRQ9UBQ7 328 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 KLHL21Q9UJP4 597 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 HSPE1-MOB4S4R3N1 261 aa12.19□□□□□ -0.46
SPTLC2-202ENST00000554365 OR6C68A6NDL8 312 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 A6NIZ1 184 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 H7C1C5 153 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 H7C417 338 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 HAX1O00165 279 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 LMX1BO60663 402 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 LY6HO94772 140 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 PGA4P0DJD7 388 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 PGA3P0DJD8 388 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 BMP4P12644 408 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 ACADSP16219 412 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 NOS3P29474 1203 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 SELENOPP49908 381 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 RAP1BP61224 184 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 LCN6P62502 163 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 RAP1AP62834 184 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 SRSF2Q01130 221 aaKnown RBP12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC25A30Q5SVS4 291 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 C9orf135Q5VTT2 229 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 AADACL4Q5VUY2 407 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 FAM205BPQ63HN1 556 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 ZNF544Q6NX49 715 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 IL17RELQ6ZVW7 336 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 BCDIN3DQ7Z5W3 292 aaKnown RBP12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 THAP5Q7Z6K1 395 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 C8orf59Q8N0T1 100 aaPredicted RBP12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 CYB561A3Q8NBI2 242 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 SETD9Q8NE22 299 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 BBS1Q8NFJ9 593 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 OR8J1Q8NGP2 316 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 TRUB1Q8WWH5 349 aaKnown RBP12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 PTP4A1Q93096 173 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 CNBD2Q96M20 576 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 SNX18Q96RF0 628 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 NMNAT3Q96T66 252 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 APOL4Q9BPW4 351 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 FN3KQ9H479 309 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 MED20Q9H944 212 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 IMPAD1Q9NX62 359 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 VSX1Q9NZR4 365 aaPredicted RBP12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 RCE1Q9Y256 329 aa12.18□□□□□ -0.46
SPTLC2-202ENST00000554365 IGKV1D-43A0A0B4J1Z2 117 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC22A23A1A5C7 686 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 PRSS37A4D1T9 235 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 FAM183AA6NL82 134 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 RIIAD1A6NNX1 92 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 GPR171O14626 319 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 MRPL33O75394 65 aaKnown RBP12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 IFNGP01579 166 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 SRD5A1P18405 259 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC2A5P22732 501 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms