RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ZFAND2BQ8WV99 257 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 HDAC2Q92769 488 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TMEM186Q96B77 213 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 BPIFA2Q96DR5 249 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 ASB9Q96DX5 294 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 POM121L2Q96KW2 1035 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 RBP7Q96R05 134 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TRIM15Q9C019 465 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CCNB1IP1Q9NPC3 277 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TUBG2Q9NRH3 451 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CYSLTR2Q9NS75 346 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 DCAF13Q9NV06 445 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 ACTR3BQ9P1U1 418 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 EIF3KQ9UBQ5 218 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 FZR1Q9UM11 496 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 A4GNTQ9UNA3 340 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 GRIP1Q9Y3R0 1128 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 SNX13Q9Y5W8 968 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 IGKV1D-43A0A0B4J1Z2 117 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 IGHV1-69-2A0A0G2JMI3 117 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 FAM157AC9JC47 383 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 PPIHO43447 177 aaKnown RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 PIP5K1CO60331 668 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 SLC2A10O95528 541 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 IFNW1P05000 195 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 COX5BP10606 129 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 IFI30P13284 250 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 CCL2P13500 99 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 ITGA2P17301 1181 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 GCH1P30793 250 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 CDAP32320 146 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 GUCA1AP43080 201 aaPredicted RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 GDI2P50395 445 aaKnown RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 MMP15P51511 669 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 SMIM11AP58511 58 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 ERVS71-1P61550 626 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 CCL8P80075 99 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 PSG4Q00888 419 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 FMODQ06828 376 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 CD47Q08722 323 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 FHL1Q13642 323 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 GK3PQ14409 553 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 LAPTM4AQ15012 233 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 TRAM2Q15035 370 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF718Q3SXZ3 478 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 LRRC23Q53EV4 343 aaPredicted RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 LCN8Q6JVE9 175 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 PGM2L1Q6PCE3 622 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 RINLQ6ZS11 566 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 DHFR2Q86XF0 187 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 MEX3DQ86XN8 651 aaKnown RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 OR1J1Q8NGS3 322 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 GEMIN6Q8WXD5 167 aaKnown RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 ACOT11Q8WXI4 607 aaPredicted RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 NSMAFQ92636 917 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 FAM162AQ96A26 154 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 MCUR1Q96AQ8 359 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 SLC7A6OSQ96CW6 309 aaPredicted RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 RAB39BQ96DA2 213 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 ELMOD3Q96FG2 381 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 MARS2Q96GW9 593 aaKnown RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 TIMD4Q96H15 378 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 TPD52L3Q96J77 140 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 NSMCE2Q96MF7 247 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 TSPAN32Q96QS1 320 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 DIRC2Q96SL1 478 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 FNDC11Q9BVV2 318 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 OR2H1Q9GZK4 316 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 ANKRD19PQ9H560 264 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 SAP30LQ9HAJ7 183 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 ELOVL3Q9HB03 270 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 MAN2C1Q9NTJ4 1040 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 HIF1ANQ9NWT6 349 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 NDRG4Q9ULP0 352 aaKnown RBP5.63□□□□□ -1.51
SLIRP-203ENST00000554074 TIMM10BQ9Y5J6 103 aa5.63□□□□□ -1.51
SLIRP-203ENST00000554074 NBEAL1Q6ZS30 2694 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 LOC100509620A0A075B734 347 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 PLSCR5A0PG75 271 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 C5orf49A4QMS7 147 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 AQP12BA6NM10 295 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 C12orf71A8MTZ7 269 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 CLDN25C9JDP6 229 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 J3QLI3 93 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 FFAR1O14842 300 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 WNT9BO14905 357 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 ARPC2O15144 300 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 GSC2O15499 205 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 DEAF1O75398 565 aaPredicted RBP5.62□□□□□ -1.51
SLIRP-203ENST00000554074 PRSS23O95084 383 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 PNPP00491 289 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 SERPINA1P01009 418 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 IGHV1-46P01743 117 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 CD55P08174 381 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 MAKP20794 623 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 MSR1P21757 451 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 GATA3P23771 443 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 WNT5AP41221 380 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF81P51508 661 aa5.62□□□□□ -1.51
SLIRP-203ENST00000554074 ARHGDIAP52565 204 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms