RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 C11orf40Q8WZ69 217 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 SLC39A7Q92504 469 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 ZNF845Q96IR2 970 aaPredicted RBP9.61□□□□□ -0.87
PABPN1-203ENST00000553960 MAP6Q96JE9 813 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 C4orf36Q96KX1 117 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 EMC6Q9BV81 110 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 MROQ9BYG7 248 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 DEFB127Q9H1M4 99 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 KCNN2Q9H2S1 579 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 C1orf198Q9H425 327 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 ZCCHC4Q9H5U6 513 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 EXO5Q9H790 373 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 MOB1AQ9H8S9 216 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 ISG20L2Q9H9L3 353 aaKnown RBP9.61□□□□□ -0.87
PABPN1-203ENST00000553960 TMEM38BQ9NVV0 291 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 CCDC59Q9P031 241 aaKnown RBP9.61□□□□□ -0.87
PABPN1-203ENST00000553960 RAXQ9Y2V3 346 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 LHFPL6Q9Y693 200 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 PHF3Q92576 2039 aaKnown RBP9.61□□□□□ -0.87
PABPN1-203ENST00000553960 FREM1Q5H8C1 2179 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 SPTA1P02549 2419 aa9.61□□□□□ -0.87
PABPN1-203ENST00000553960 ZFHX4Q86UP3 3567 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 TRAV1-2A0A0B4J238 106 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 TMEM212A6NML5 194 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 OR4C45A6NMZ5 311 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 MRPL33O75394 65 aaKnown RBP9.6□□□□□ -0.87
PABPN1-203ENST00000553960 GPX5O75715 221 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ATE1O95260 518 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 OPN1LWP04000 364 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 COX5BP10606 129 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 CELP19835 753 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 CFL1P23528 166 aaKnown RBP9.6□□□□□ -0.87
PABPN1-203ENST00000553960 GADD45AP24522 165 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 RFC3P40938 356 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 NAA10P41227 235 aaPredicted RBP9.6□□□□□ -0.87
PABPN1-203ENST00000553960 SELENOPP49908 381 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 PCBD1P61457 104 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ADAM8P78325 824 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 FMODQ06828 376 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ENDOGQ14249 297 aaKnown RBP9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ETFDHQ16134 617 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 FAM220AQ7Z4H9 259 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 TPRA1Q86W33 373 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 UBQLNLQ8IYU4 475 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 GJC3Q8NFK1 279 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 OR6N1Q8NGY5 312 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 OR6N2Q8NGY6 317 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ABHD3Q8WU67 409 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ROBO4Q8WZ75 1007 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 DCBLD2Q96PD2 775 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ULBP2Q9BZM5 246 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 PNRC2Q9NPJ4 139 aaKnown RBP9.6□□□□□ -0.87
PABPN1-203ENST00000553960 SSR3Q9UNL2 185 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 GSTK1Q9Y2Q3 226 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 KLHDC2Q9Y2U9 406 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 NOSIPQ9Y314 301 aaKnown RBP9.6□□□□□ -0.87
PABPN1-203ENST00000553960 ARHGAP21Q5T5U3 1957 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 CHD8Q9HCK8 2581 aa9.6□□□□□ -0.87
PABPN1-203ENST00000553960 CELSR3Q9NYQ7 3312 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 A0A075B6Q4 140 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 TRBV5-5A0A0J9YX44 114 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 PRR32B1ATL7 298 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 K7EM74 188 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 ICMTO60725 284 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 SERPINI2O75830 405 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 APOL3O95236 402 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 IL18BPO95998 194 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 MRPL3P09001 348 aaKnown RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 TCEA1P23193 301 aaKnown RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 AGTR1P30556 359 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 CD79BP40259 229 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 RIDAP52758 137 aaKnown RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 RPS11P62280 158 aaKnown RBP eCLIP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 GRB2P62993 217 aaKnown RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 LSAMPQ13449 338 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 ALKBH1Q13686 389 aaKnown RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 MEP1BQ16820 701 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 ACSF3Q4G176 576 aaPredicted RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 LIPKQ5VXJ0 399 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 FAM180AQ6UWF9 173 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 TMEM91Q6ZNR0 172 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 FAM214BQ7L5A3 538 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 KRT74Q7RTS7 529 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 KLBQ86Z14 1044 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 CROCCP3Q8IVE0 287 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 C1orf162Q8NEQ5 155 aaPredicted RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 OR10H5Q8NGA6 315 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 OR6K3Q8NGY3 331 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 OR2G2Q8NGZ5 317 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 NAA50Q9GZZ1 169 aaKnown RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 HDHD2Q9H0R4 259 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 GPR35Q9HC97 309 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 MOV10Q9HCE1 1003 aaKnown RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 PLSCR4Q9NRQ2 329 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 ZNF391Q9UJN7 358 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 TP53TG5Q9Y2B4 290 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 ZNF281Q9Y2X9 895 aa9.59□□□□□ -0.87
PABPN1-203ENST00000553960 SIRT4Q9Y6E7 314 aaPredicted RBP9.59□□□□□ -0.87
PABPN1-203ENST00000553960 IGHV3-15A0A0B4J1V0 119 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms