RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ADAM8P78325 824 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 GALK2Q01415 458 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 SPOCK1Q08629 439 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 KCNMB1Q16558 191 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 LRRC36Q1X8D7 754 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 TBC1D28Q2M2D7 210 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 ZIK1Q3SY52 487 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-202ENST00000553656 KLHL12Q53G59 568 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 C12orf73Q69YU5 71 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 CXXC5Q7LFL8 322 aaKnown RBP12.03□□□□□ -0.48
TUBB3-202ENST00000553656 CPOQ8IVL8 374 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 SLC30A7Q8NEW0 376 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 OR2AJ1Q8NGZ0 328 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 NMNAT2Q9BZQ4 307 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 OR2H1Q9GZK4 316 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 VCXQ9H320 206 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 MED20Q9H944 212 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 CDH20Q9HBT6 801 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 HINT3Q9NQE9 182 aaKnown RBP12.03□□□□□ -0.48
TUBB3-202ENST00000553656 IMPAD1Q9NX62 359 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 ASH2LQ9UBL3 628 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 KCNG2Q9UJ96 466 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 SPEF1Q9Y4P9 236 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 FLNBO75369 2602 aaKnown RBP12.02□□□□□ -0.49
TUBB3-202ENST00000553656 HS3ST1O14792 307 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 PRODHO43272 600 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 SGCEO43556 437 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 DOK2O60496 412 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 TMCC2O75069 709 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 SCG5P05408 212 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 PEX2P28328 305 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 POLR2IP36954 125 aaKnown RBP12.02□□□□□ -0.49
TUBB3-202ENST00000553656 GDI2P50395 445 aaKnown RBP12.02□□□□□ -0.49
TUBB3-202ENST00000553656 KRTAP10-9P60411 292 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 PSG4Q00888 419 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 MEP1BQ16820 701 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF672Q499Z4 452 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-202ENST00000553656 OTPQ5XKR4 325 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 GALNT4Q8N4A0 578 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 TCEANCQ8N8B7 351 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 OR4F15Q8NGB8 312 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 AKR7LQ8NHP1 331 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 FBXW5Q969U6 566 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 LURAP1Q96LR2 239 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 SLC29A1Q99808 456 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 TOR3AQ9H497 397 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 PLEK2Q9NYT0 353 aa12.02□□□□□ -0.49
TUBB3-202ENST00000553656 H2AFY2Q9P0M6 372 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-202ENST00000553656 IGHV2OR16-5A0A0B4J2B6 119 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 A0A1W2PPR1 153 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 TVP23AA6NH52 213 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 VSTM5A8MXK1 200 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 SHISA9B4DS77 424 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 TLX2O43763 284 aaPredicted RBP12.01□□□□□ -0.49
TUBB3-202ENST00000553656 PRKYO43930 277 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 GLCEO94923 617 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 TFP02787 698 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 SPARCP09486 303 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 CCNOP22674 350 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 STOMP27105 288 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 GSTT1P30711 240 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 HTR5AP47898 357 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 SLC34A1Q06495 639 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 DBPQ10586 325 aaPredicted RBP12.01□□□□□ -0.49
TUBB3-202ENST00000553656 SLC35D3Q5M8T2 416 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 LCN1P1Q5VSP4 162 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 LPCAT4Q643R3 524 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF774Q6NX45 483 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 C20orf204Q6ZNR8 217 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 MYPOPQ86VE0 399 aaPredicted RBP12.01□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF584Q8IVC4 421 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 PACRGLQ8N7B6 248 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 FAM81AQ8TBF8 368 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 TMEM163Q8TC26 289 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 PTP4A1Q93096 173 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF75AQ96N20 296 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 RDH12Q96NR8 316 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 HCAR1Q9BXC0 346 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 PLEKHF2Q9H8W4 249 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 RNPEPL1Q9HAU8 725 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 FAIMQ9NVQ4 179 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 SMPD3Q9NY59 655 aaPredicted RBP12.01□□□□□ -0.49
TUBB3-202ENST00000553656 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
TUBB3-202ENST00000553656 NDRG4Q9ULP0 352 aaKnown RBP12.01□□□□□ -0.49
TUBB3-202ENST00000553656 COMMD3-BMI1R4GMX3 469 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 PRR14LQ5THK1 2151 aa12.01□□□□□ -0.49
TUBB3-202ENST00000553656 M0R129 80 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 RRP9O43818 475 aaKnown RBP12□□□□□ -0.49
TUBB3-202ENST00000553656 SNAP29O95721 258 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 APEX1P27695 318 aaKnown RBP12□□□□□ -0.49
TUBB3-202ENST00000553656 CALCRP30988 508 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 ENTPD1P49961 510 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 APOFQ13790 326 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 KEAP1Q14145 624 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 RAB35Q15286 201 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 KRT80Q6KB66 452 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms