RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ZNF670-ZNF695F2Z2N8 137 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 K7EM74 188 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MYL12BO14950 172 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SMAD9O15198 467 aaKnown RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 XPNPEP2O43895 674 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 HRGP04196 525 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 QDPRP09417 244 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TACSTD2P09758 323 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 HLA-DOBP13765 273 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 NPR2P20594 1047 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 LAP3P28838 519 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 RPS19P39019 145 aaKnown RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SLC15A1P46059 708 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 NUDT6P53370 316 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MLLT10P55197 1068 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SLC35A2P78381 396 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF91Q05481 1191 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MRPL28Q13084 256 aaKnown RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 CAMK2DQ13557 499 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MELKQ14680 651 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SMN1Q16637 294 aaKnown RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 NRN1LQ496H8 165 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 NADK2Q4G0N4 442 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MESTQ5EB52 335 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 RIPPLY2Q5TAB7 128 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF324BQ6AW86 544 aaPredicted RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ABLIM2Q6H8Q1 611 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF544Q6NX49 715 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 KCTD18Q6PI47 426 aaPredicted RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF773Q6PK81 442 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 GFRALQ6UXV0 394 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 NHLRC1Q6VVB1 395 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 PLEKHG7Q6ZR37 379 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 AHSA2Q719I0 299 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SLC16A9Q7RTY1 509 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ADGRE4PQ86SQ3 457 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ZBTB46Q86UZ6 589 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 C20orf196Q8IYI0 205 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF100Q8IYN0 542 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 CYB561A3Q8NBI2 242 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 OR9Q1Q8NGQ5 310 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 OR6K6Q8NGW6 343 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 OR2AJ1Q8NGZ0 328 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 FAM57AQ8TBR7 257 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 CPT1CQ8TCG5 803 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 RNF128Q8TEB7 428 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ASB17Q8WXJ9 295 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM54Q969K7 222 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 RASD2Q96D21 266 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 LGALS12Q96DT0 336 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TXNDC15Q96J42 360 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TAAR6Q96RI8 345 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TRIB1Q96RU8 372 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 INTS14Q96SY0 518 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 CNN2Q99439 309 aaKnown RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TUBA1CQ9BQE3 449 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 EMC6Q9BV81 110 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MRPL13Q9BYD1 178 aaKnown RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SRXN1Q9BYN0 137 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 LINC00470Q9BZP3 86 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 NUAK2Q9H093 628 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SYT4Q9H2B2 425 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 TP63Q9H3D4 680 aaPredicted RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 RERGLQ9H628 205 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 BCO1Q9HAY6 547 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ISYNA1Q9NPH2 558 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 FKBP14Q9NWM8 211 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MED29Q9NX70 200 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 KLHL13Q9P2N7 655 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 B3GAT1Q9P2W7 334 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ERVK-18Q9QC07 812 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SPRR3Q9UBC9 169 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SEC14L4Q9UDX3 406 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 KCNG2Q9UJ96 466 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 ING1Q9UK53 422 aaPredicted RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 DIMT1Q9UNQ2 313 aaKnown RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 CAB39Q9Y376 341 aaPredicted RBP4.43□□□□□ -1.7
VTI1B-202ENST00000553619 LIPGQ9Y5X9 500 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 FLVCR1Q9Y5Y0 555 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 MUC3AQ02505 3323 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 APC2O95996 2303 aa4.43□□□□□ -1.7
VTI1B-202ENST00000553619 SPTBN2O15020 2390 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 A0A0G2JNJ9 132 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TRIM64CA6NLI5 447 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF716A6NP11 495 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 HSPB2A8KAH6 182 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF99A8MXY4 864 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 H0YC42 278 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 RPL36A-HNRNPH2H7BZ11 118 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF593O00488 134 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 DHHO43323 396 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TRAF3IP2O43734 574 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 AQP8O94778 261 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 FARS2O95363 451 aaKnown RBP4.42□□□□□ -1.7
VTI1B-202ENST00000553619 TPOP07202 933 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 STSP08842 583 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 SBK2P0C263 348 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 PGA4P0DJD7 388 aa4.42□□□□□ -1.7
VTI1B-202ENST00000553619 PGA3P0DJD8 388 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms