RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SNRPD2P62316 118 aaKnown RBP15.93■□□□□ 0.14
CPSF2-202ENST00000553427 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.93■□□□□ 0.14
CPSF2-202ENST00000553427 SCRN3Q0VDG4 424 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 AQP6Q13520 282 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 ATP6AP1Q15904 470 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 KRT80Q6KB66 452 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 YTHDF3Q7Z739 585 aaKnown RBP15.93■□□□□ 0.14
CPSF2-202ENST00000553427 OR6V1Q8N148 313 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 CPEB3Q8NE35 698 aaKnown RBP15.93■□□□□ 0.14
CPSF2-202ENST00000553427 DNAJC9Q8WXX5 260 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 DDOQ99489 341 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 TMUB1Q9BVT8 246 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 TSSK6Q9BXA6 273 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 WNT5BQ9H1J7 359 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 PLK3Q9H4B4 646 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 CDH20Q9HBT6 801 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 REV1Q9UBZ9 1251 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 B9D1Q9UPM9 204 aa15.93■□□□□ 0.14
CPSF2-202ENST00000553427 COA3Q9Y2R0 106 aaPredicted RBP15.93■□□□□ 0.14
CPSF2-202ENST00000553427 TEP1Q99973 2627 aaKnown RBP15.92■□□□□ 0.14
CPSF2-202ENST00000553427 OR6C68A6NDL8 312 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 TIPRLO75663 272 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 SOX14O95416 240 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 COX5BP10606 129 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 STOMP27105 288 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 APLNRP35414 380 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 EVX1P49640 407 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 ARHGDIAP52565 204 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 GLO1Q04760 184 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 ZNF362Q5T0B9 420 aaPredicted RBP15.92■□□□□ 0.14
CPSF2-202ENST00000553427 VHLLQ6RSH7 139 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 UGT2A3Q6UWM9 527 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 ALDH16A1Q8IZ83 802 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 PAQR4Q8N4S7 273 aaPredicted RBP15.92■□□□□ 0.14
CPSF2-202ENST00000553427 SDR9C7Q8NEX9 313 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 OR52E2Q8NGJ4 325 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 OR4Q3Q8NH05 313 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 TEX47Q8TBZ9 253 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 POM121L2Q96KW2 1035 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 TSSK2Q96PF2 358 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 ZNF556Q9HAH1 456 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 EMC7Q9NPA0 242 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 KLHL21Q9UJP4 597 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 CMAHPQ9Y471 501 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 AP4S1Q9Y587 144 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 PMF1-BGLAPU3KQ54 211 aa15.92■□□□□ 0.14
CPSF2-202ENST00000553427 IGHV4-39P01824 125 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 IGFBP1P08833 259 aaPredicted RBP15.91■□□□□ 0.14
CPSF2-202ENST00000553427 APEX1P27695 318 aaKnown RBP15.91■□□□□ 0.14
CPSF2-202ENST00000553427 PPOXP50336 477 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 SLC36A3Q495N2 470 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 SLC35F1Q5T1Q4 408 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 HS3ST5Q8IZT8 346 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 SLC26A10Q8NG04 563 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 AKR7LQ8NHP1 331 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 C11orf40Q8WZ69 217 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 MRPL24Q96A35 216 aaKnown RBP15.91■□□□□ 0.14
CPSF2-202ENST00000553427 RERGLQ9H628 205 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 RPRD1BQ9NQG5 326 aaKnown RBP15.91■□□□□ 0.14
CPSF2-202ENST00000553427 DLL4Q9NR61 685 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 ATPIF1Q9UII2 106 aa15.91■□□□□ 0.14
CPSF2-202ENST00000553427 NDRG4Q9ULP0 352 aaKnown RBP15.91■□□□□ 0.14
CPSF2-202ENST00000553427 GPRIN2O60269 458 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 IFNGP01579 166 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 OSMP13725 252 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 FASP25445 335 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 GRK5P34947 590 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 GDI2P50395 445 aaKnown RBP15.9■□□□□ 0.14
CPSF2-202ENST00000553427 SLC25A1P53007 311 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 ACTR3P61158 418 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 FAHD1Q6P587 224 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 C1orf174Q8IYL3 243 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 SLC37A3Q8NCC5 494 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 OR2T4Q8NH00 348 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 OR5K1Q8NHB7 308 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 FOXN4Q96NZ1 517 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 DOK1Q99704 481 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 BDH2Q9BUT1 245 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 RBM4Q9BWF3 364 aaKnown RBP15.9■□□□□ 0.14
CPSF2-202ENST00000553427 BCL2L14Q9BZR8 327 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 CMC2Q9NRP2 79 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 ASH2LQ9UBL3 628 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 KCNG2Q9UJ96 466 aa15.9■□□□□ 0.14
CPSF2-202ENST00000553427 ACANP16112 2415 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 ARFGEF3Q5TH69 2177 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 MTORP42345 2549 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 LOC100509620A0A075B734 347 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 TMEM129A0AVI4 362 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 H3BN98 237 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 SGCEO43556 437 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 MPZL1O95297 269 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 CCL2P13500 99 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 FOSL1P15407 271 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 RAD52P43351 418 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 UCP2P55851 309 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 HIST1H3AP68431 136 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 MSMPQ1L6U9 139 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 HIST2H3PS2Q5TEC6 136 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 ZNF774Q6NX45 483 aa15.89■□□□□ 0.13
CPSF2-202ENST00000553427 UNQ6126/PRO20091Q6UXV3 157 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms