RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 OR6N1Q8NGY5 312 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 OR51A7Q8NH64 312 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 OR6X1Q8NH79 312 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 MOSPD2Q8NHP6 518 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF418Q8TF45 676 aaPredicted RBP10.13□□□□□ -0.79
CKAP4-202ENST00000552828 ZMYND19Q96E35 227 aaPredicted RBP10.13□□□□□ -0.79
CKAP4-202ENST00000552828 FAM46AQ96IP4 442 aaKnown RBP10.13□□□□□ -0.79
CKAP4-202ENST00000552828 FOXB1Q99853 325 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 FUZQ9BT04 418 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF416Q9BWM5 594 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 ULBP2Q9BZM5 246 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 TREM2Q9NZC2 230 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 AURKCQ9UQB9 309 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 HIF3AQ9Y2N7 669 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 TRAV27A0A087WT01 109 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 MCIDASD6RGH6 385 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 TNFRSF11BO00300 401 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 PPIHO43447 177 aaKnown RBP10.12□□□□□ -0.79
CKAP4-202ENST00000552828 WIPF1O43516 503 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 OR10H3O60404 316 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 NAT2P11245 290 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF250P15622 560 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 OMPP47874 163 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 DAP3P51398 398 aaKnown RBP10.12□□□□□ -0.79
CKAP4-202ENST00000552828 HMGA2P52926 109 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 MYBPC1Q00872 1141 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 RAB39AQ14964 217 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 ZBED5Q49AG3 693 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 OR2T5Q6IEZ7 315 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 C1orf229Q6ZS94 237 aaPredicted RBP10.12□□□□□ -0.79
CKAP4-202ENST00000552828 HDDC2Q7Z4H3 204 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 SKA3Q8IX90 412 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 ADGRG5Q8IZF4 528 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 LINC00471Q8N535 108 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 OR13C2Q8NGS9 318 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 OR2T29Q8NH02 315 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 SGMS2Q8NHU3 365 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 CANT1Q8WVQ1 401 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 TMEM54Q969K7 222 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF566Q969W8 418 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 SLC25A44Q96H78 314 aaPredicted RBP10.12□□□□□ -0.79
CKAP4-202ENST00000552828 CHID1Q9BWS9 393 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 NDEL1Q9GZM8 345 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 NARFLQ9H6Q4 476 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 G6PC2Q9NQR9 355 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 NKIRAS2Q9NYR9 191 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 STX18Q9P2W9 335 aaKnown RBP10.12□□□□□ -0.79
CKAP4-202ENST00000552828 DUSP13Q9UII6 198 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 PCDHB10Q9UN67 800 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
CKAP4-202ENST00000552828 IGLV3-9A0A075B6K5 115 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 TCRBV3S1A0A5B6 114 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 SLC22A23A1A5C7 686 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 NPIPB13A6NJU9 1138 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 C17orf100A8MU93 164 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 NPIPB4C9JG80 1138 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 CDC42EP2O14613 210 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 PNPP00491 289 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 AVPP01185 164 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 IGHG1P01857 330 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 ANPEPP15144 967 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 EGR1P18146 543 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 LIMS1P48059 325 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 CSNK1A1P48729 337 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 CTXN1P60606 82 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 MELKQ14680 651 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 PCGF3Q3KNV8 242 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 FAHD2BQ6P2I3 314 aaPredicted RBP10.11□□□□□ -0.79
CKAP4-202ENST00000552828 SHQ1Q6PI26 577 aaKnown RBP10.11□□□□□ -0.79
CKAP4-202ENST00000552828 LRFN4Q6PJG9 635 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 ZER1Q7Z7L7 766 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 PEG10Q86TG7 708 aaKnown RBP10.11□□□□□ -0.79
CKAP4-202ENST00000552828 SLC22A24Q8N4F4 322 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 FGFBP3Q8TAT2 258 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 FAHD2AQ96GK7 314 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 TXNIPQ9H3M7 391 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 REEP1Q9H902 201 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 LPAR2Q9HBW0 351 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 GLTPQ9NZD2 209 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 FZR1Q9UM11 496 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 LYVE1Q9Y5Y7 322 aa10.11□□□□□ -0.79
CKAP4-202ENST00000552828 A0A1W2PPW3 197 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 UNC119BA6NIH7 251 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 CENPBD1B2RD01 187 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 ENTPD5O75356 428 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 PTP4A3O75365 173 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 DEAF1O75398 565 aaPredicted RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 CIB2O75838 187 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 SNAP29O95721 258 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 CST1P01037 141 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 PATE4P0C8F1 98 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 OR8G3PP0DMU2 310 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 ACADSP16219 412 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 EPHA1P21709 976 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 RPL4P36578 427 aaKnown RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 CRYBB2P43320 205 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 MAGEB1P43366 347 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 CLRN1P58418 232 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 ACTG1P63261 375 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 FHL1Q13642 323 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms