RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 HMGN1P05114 100 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 ZNF3P17036 446 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 APOBEC3AP31941 199 aaPredicted RBP16.76■□□□□ 0.27
DDX54-207ENST00000550016 SLC25A1P53007 311 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 CRISP1P54107 249 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 CRMP1Q14194 572 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 DEFB113Q30KQ7 82 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 KDM4DQ6B0I6 523 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 ZNF544Q6NX49 715 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 ALDH16A1Q8IZ83 802 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 FBXL14Q8N1E6 418 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 ICA1LQ8NDH6 482 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 SLC30A7Q8NEW0 376 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 NUP37Q8NFH4 326 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 OR1J2Q8NGS2 313 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 TMEM171Q8WVE6 324 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 RBM4Q9BWF3 364 aaKnown RBP16.76■□□□□ 0.27
DDX54-207ENST00000550016 OSBPL10Q9BXB5 764 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 OR2H1Q9GZK4 316 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 WNT5BQ9H1J7 359 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 SLC25A19Q9HC21 320 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 ITGB1BP2Q9UKP3 347 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 LAMP3Q9UQV4 416 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 SPEF1Q9Y4P9 236 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 ARFGEF3Q5TH69 2177 aa16.76■□□□□ 0.27
DDX54-207ENST00000550016 CSMD2Q7Z408 3487 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 SAC3D1A6NKF1 404 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 FAM171A2A8MVW0 826 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 SOD3P08294 240 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 GAAP10253 952 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 NR4A1P22736 598 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 APEX1P27695 318 aaKnown RBP16.75■□□□□ 0.27
DDX54-207ENST00000550016 PYCR1P32322 319 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 TTKP33981 857 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 APLNRP35414 380 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 ESRRGP62508 458 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 DBPQ10586 325 aaPredicted RBP16.75■□□□□ 0.27
DDX54-207ENST00000550016 AQP6Q13520 282 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 DAG1Q14118 895 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 AGAP6Q5VW22 663 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 DTX2Q86UW9 622 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 CPEB3Q8NE35 698 aaKnown RBP16.75■□□□□ 0.27
DDX54-207ENST00000550016 SLC26A10Q8NG04 563 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 AKR7LQ8NHP1 331 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 TEX12Q9BXU0 123 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 NMNAT2Q9BZQ4 307 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 GRIP2Q9C0E4 1043 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 CDH20Q9HBT6 801 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 CA10Q9NS85 328 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 USF3Q68DE3 2245 aa16.75■□□□□ 0.27
DDX54-207ENST00000550016 MITFO75030 526 aaPredicted RBP16.74■□□□□ 0.27
DDX54-207ENST00000550016 CD8AP01732 235 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 HLA-DQA2P01906 255 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 STOMP27105 288 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 GALK2Q01415 458 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 TEKQ02763 1124 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 SCRN3Q0VDG4 424 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 MEP1BQ16820 701 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 TBC1D28Q2M2D7 210 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 TMEM236Q5W0B7 351 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 PROKR2Q8NFJ6 384 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 OR9Q1Q8NGQ5 310 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 FOXC2Q99958 501 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 TRAF4Q9BUZ4 470 aaPredicted RBP16.74■□□□□ 0.27
DDX54-207ENST00000550016 ENOPH1Q9UHY7 261 aa16.74■□□□□ 0.27
DDX54-207ENST00000550016 TMEFF2Q9UIK5 374 aaPredicted RBP16.74■□□□□ 0.27
DDX54-207ENST00000550016 PRRC2AP48634 2157 aaKnown RBP16.73■□□□□ 0.27
DDX54-207ENST00000550016 VSTM5A8MXK1 200 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 SURF4O15260 269 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 SMPD2O60906 423 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 SNAP29O95721 258 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 TFP02787 698 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 CCL2P13500 99 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 PAICSP22234 425 aaKnown RBP16.73■□□□□ 0.27
DDX54-207ENST00000550016 IGFBP5P24593 272 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 ART1P52961 327 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 NKX6-1P78426 367 aaPredicted RBP16.73■□□□□ 0.27
DDX54-207ENST00000550016 PTGES3Q15185 160 aaKnown RBP16.73■□□□□ 0.27
DDX54-207ENST00000550016 OTPQ5XKR4 325 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 KRT80Q6KB66 452 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 ZNF774Q6NX45 483 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 VHLLQ6RSH7 139 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.73■□□□□ 0.27
DDX54-207ENST00000550016 MUC15Q8N387 334 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 OR10H5Q8NGA6 315 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 STMN2Q93045 179 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 RBM4BQ9BQ04 359 aaKnown RBP16.73■□□□□ 0.27
DDX54-207ENST00000550016 CXorf56Q9H5V9 222 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 ZNF442Q9H7R0 627 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 CBLN4Q9NTU7 201 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 ASH2LQ9UBL3 628 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 POLR1DQ9Y2S0 133 aa16.73■□□□□ 0.27
DDX54-207ENST00000550016 OVOL3O00110 214 aa16.72■□□□□ 0.27
DDX54-207ENST00000550016 SGCEO43556 437 aa16.72■□□□□ 0.27
DDX54-207ENST00000550016 COX5BP10606 129 aa16.72■□□□□ 0.27
DDX54-207ENST00000550016 SPI1P17947 270 aa16.72■□□□□ 0.27
DDX54-207ENST00000550016 THBS4P35443 961 aa16.72■□□□□ 0.27
DDX54-207ENST00000550016 GDI2P50395 445 aaKnown RBP16.72■□□□□ 0.27
DDX54-207ENST00000550016 PPP2R2BQ00005 443 aa16.72■□□□□ 0.27
DDX54-207ENST00000550016 SNTB2Q13425 540 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms