RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 EMC7Q9NPA0 242 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 TMEFF2Q9UIK5 374 aaPredicted RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 TMEM5Q9Y2B1 443 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 FAM32AQ9Y421 112 aaKnown RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 TIMM10BQ9Y5J6 103 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 DIRAS1O95057 198 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 IGHV3-13P01766 116 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 MT-ND5P03915 603 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 SCG5P05408 212 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 PRDX6P30041 224 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 SRSF2Q01130 221 aaKnown RBP13.93□□□□□ -0.18
VPS29-207ENST00000549970 ENDOGQ14249 297 aaKnown RBP13.93□□□□□ -0.18
VPS29-207ENST00000549970 MOGQ16653 247 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 TSTQ16762 297 aaKnown RBP13.93□□□□□ -0.18
VPS29-207ENST00000549970 ZNF718Q3SXZ3 478 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 UNQ6126/PRO20091Q6UXV3 157 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 FAM86B1Q8N7N1 296 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 FAM156AQ8NDB6 213 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 MARS2Q96GW9 593 aaKnown RBP13.93□□□□□ -0.18
VPS29-207ENST00000549970 C1orf159Q96HA4 380 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 OR2J1Q9GZK6 312 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 NDEL1Q9GZM8 345 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 LPAR2Q9HBW0 351 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 POLE4Q9NR33 117 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 DECR2Q9NUI1 292 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 TREM2Q9NZC2 230 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 NDUFAF4Q9P032 175 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 V9GYQ6 96 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 STAB1Q9NY15 2570 aa13.93□□□□□ -0.18
VPS29-207ENST00000549970 TEX13CA0A0J9YWL9 993 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 A0A1W2PRQ8 180 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 C12orf71A8MTZ7 269 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 B4DSR2 109 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 FAM157AC9JC47 383 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 GMNNO75496 209 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 RHCEP18577 417 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 THBS2P35442 1172 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 ZNF81P51508 661 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 DVL1P1P54792 670 aaPredicted RBP13.92□□□□□ -0.18
VPS29-207ENST00000549970 PPP1CBP62140 327 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 DGCR6Q14129 220 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 KRTAP24-1Q3LI83 254 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 TMEM255AQ5JRV8 349 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 AVPI1Q5T686 147 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 RINLQ6ZS11 566 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 USP51Q70EK9 711 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 FAM122BQ7Z309 247 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 KLF14Q8TD94 323 aaPredicted RBP13.92□□□□□ -0.18
VPS29-207ENST00000549970 RASD2Q96D21 266 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 NSRP1Q9H0G5 558 aaKnown RBP13.92□□□□□ -0.18
VPS29-207ENST00000549970 RACGAP1Q9H0H5 632 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 SAP30LQ9HAJ7 183 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 DCAF13Q9NV06 445 aaKnown RBP13.92□□□□□ -0.18
VPS29-207ENST00000549970 NKIRAS2Q9NYR9 191 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 IL20RAQ9UHF4 553 aa13.92□□□□□ -0.18
VPS29-207ENST00000549970 SAMD4AQ9UPU9 718 aaKnown RBP13.92□□□□□ -0.18
VPS29-207ENST00000549970 IGHV1-69-2A0A0G2JMI3 117 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 TRBV4-1A0A0J9YWV2 114 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 PLSCR5A0PG75 271 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 PRSS37A4D1T9 235 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 ATP8B1O43520 1251 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 SPRY3O43610 288 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 SNX3O60493 162 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 NDUFB2O95178 105 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 NGFP01138 241 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 TFP02787 698 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 CTLA4P16410 223 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 SRP14P37108 136 aaKnown RBP13.91□□□□□ -0.18
VPS29-207ENST00000549970 OMPP47874 163 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 LIMS1P48059 325 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 TEKQ02763 1124 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 MVKQ03426 396 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 KRR1Q13601 381 aaKnown RBP13.91□□□□□ -0.18
VPS29-207ENST00000549970 SEC23BQ15437 767 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 MBNL2Q5VZF2 373 aaKnown RBP13.91□□□□□ -0.18
VPS29-207ENST00000549970 OTPQ5XKR4 325 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 THSD4Q6ZMP0 1018 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 CPLX4Q7Z7G2 160 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 SYT9Q86SS6 491 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 GLCCI1Q86VQ1 547 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 OR52J3Q8NH60 311 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 RSRC1Q96IZ7 334 aaKnown RBP13.91□□□□□ -0.18
VPS29-207ENST00000549970 C4orf45Q96LM5 186 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 SYT4Q9H2B2 425 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 RERGLQ9H628 205 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 ELOVL3Q9HB03 270 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 NDRG4Q9ULP0 352 aaKnown RBP13.91□□□□□ -0.18
VPS29-207ENST00000549970 AURKCQ9UQB9 309 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 SIGLEC7Q9Y286 467 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 CACNG2Q9Y698 323 aa13.91□□□□□ -0.18
VPS29-207ENST00000549970 IMPA2O14732 288 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 AHCYL1O43865 530 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 DOK2O60496 412 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 PTP4A3O75365 173 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 ABHD16AO95870 558 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 IGHV1-46P01743 117 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 GAAP10253 952 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 PCMT1P22061 227 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 SDHAP31040 664 aa13.9□□□□□ -0.18
VPS29-207ENST00000549970 CRYBB2P43320 205 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms