RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TMEM239Q8WW34 195 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 DYDC1Q8WWB3 177 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 GEMIN6Q8WXD5 167 aaKnown RBP11.48□□□□□ -0.57
TROAP-211ENST00000549891 STON2Q8WXE9 905 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 HDAC2Q92769 488 aaKnown RBP11.48□□□□□ -0.57
TROAP-211ENST00000549891 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 SH3GL1Q99961 368 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 ALG12Q9BV10 488 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 OR2H1Q9GZK4 316 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 TUBG2Q9NRH3 451 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 PLEK2Q9NYT0 353 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 KLHL21Q9UJP4 597 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 NDRG4Q9ULP0 352 aaKnown RBP11.48□□□□□ -0.57
TROAP-211ENST00000549891 POLR3KQ9Y2Y1 108 aaPredicted RBP11.48□□□□□ -0.57
TROAP-211ENST00000549891 MED31Q9Y3C7 131 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 AUP1Q9Y679 476 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 DOCK11Q5JSL3 2073 aa11.48□□□□□ -0.57
TROAP-211ENST00000549891 HTR3EA5X5Y0 456 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 IGHV2-70P01814 119 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 IGHMP01871 453 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 SBK2P0C263 348 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 GSTM3P21266 225 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 FMODQ06828 376 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 ZNF154Q13106 437 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 TMEM155Q4W5P6 130 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 ALG10Q5BKT4 473 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 FAM205BPQ63HN1 556 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 SLC25A47Q6Q0C1 308 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 RFPL4BQ6ZWI9 263 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 NPEPL1Q8NDH3 523 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 MOSPD2Q8NHP6 518 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 NMD3Q96D46 503 aaKnown RBP11.47□□□□□ -0.57
TROAP-211ENST00000549891 SAMD8Q96LT4 415 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 MRI1Q9BV20 369 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 WNT5BQ9H1J7 359 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 MSL2Q9HCI7 577 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 MAN2C1Q9NTJ4 1040 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 C20orf141Q9NUB4 165 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 TMEM106BQ9NUM4 274 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 RIMS3Q9UJD0 308 aa11.47□□□□□ -0.57
TROAP-211ENST00000549891 IGKV1D-43A0A0B4J1Z2 117 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 C12orf71A8MTZ7 269 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 SURF4O15260 269 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 KCNAB3O43448 404 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 IFNA14P01570 189 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 ZFP36P26651 326 aaKnown RBP11.46□□□□□ -0.57
TROAP-211ENST00000549891 LAP3P28838 519 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 IFNA8P32881 189 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 RPL27P61353 136 aaKnown RBP11.46□□□□□ -0.57
TROAP-211ENST00000549891 CDK5R2Q13319 367 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 TOP3AQ13472 1001 aaPredicted RBP11.46□□□□□ -0.57
TROAP-211ENST00000549891 CYLC2Q14093 348 aaPredicted RBP11.46□□□□□ -0.57
TROAP-211ENST00000549891 LAPTM4AQ15012 233 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 TMEM255AQ5JRV8 349 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 SYT9Q86SS6 491 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 DEFB108BQ8NET1 73 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 SLC25A28Q96A46 364 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 LRRC58Q96CX6 371 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 DCLRE1CQ96SD1 692 aaKnown RBP11.46□□□□□ -0.57
TROAP-211ENST00000549891 WACQ9BTA9 647 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 PATZ1Q9HBE1 687 aaKnown RBP11.46□□□□□ -0.57
TROAP-211ENST00000549891 MMP26Q9NRE1 261 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 EGFL7Q9UHF1 273 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 HIF3AQ9Y2N7 669 aa11.46□□□□□ -0.57
TROAP-211ENST00000549891 TRRAPQ9Y4A5 3859 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 A6NIZ1 184 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 POM121CA8CG34 1229 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 ABHD16AO95870 558 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 NGFP01138 241 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 COX5BP10606 129 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 ZNF12P17014 697 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 MSR1P21757 451 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 CPT2P23786 658 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 SLC6A9P48067 706 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 CRYBA2P53672 197 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 RAP1BP61224 184 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 BTG1P62324 171 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 RAP1AP62834 184 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 IL13RA1P78552 427 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 BAMBIQ13145 260 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 PIN1Q13526 163 aaPredicted RBP11.45□□□□□ -0.58
TROAP-211ENST00000549891 ESCO2Q56NI9 601 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 ZNF774Q6NX45 483 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 LRRC28Q86X40 367 aaPredicted RBP11.45□□□□□ -0.58
TROAP-211ENST00000549891 MUC20Q8N307 709 aaPredicted RBP11.45□□□□□ -0.58
TROAP-211ENST00000549891 ZNF283Q8N7M2 679 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 COG8Q96MW5 612 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 ECSITQ9BQ95 431 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 MS4A7Q9GZW8 240 aaPredicted RBP11.45□□□□□ -0.58
TROAP-211ENST00000549891 NPHS2Q9NP85 383 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 TBCCD1Q9NVR7 557 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 ZNF69Q9UC07 566 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 OR5V1Q9UGF6 321 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 IL19Q9UHD0 177 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 INSIG2Q9Y5U4 225 aa11.45□□□□□ -0.58
TROAP-211ENST00000549891 A8MXK9 166 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms