RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ACAA2P42765 397 aaKnown RBP10□□□□□ -0.81
LINC00661-204ENST00000549354 ARL4DP49703 201 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 AKR1D1P51857 326 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 ACTA2P62736 377 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 ACTG2P63267 376 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 CT45A2Q5DJT8 189 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 CDCP2Q5VXM1 449 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 CARD17Q5XLA6 110 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 TMEM71Q6P5X7 295 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 RHOUQ7L0Q8 258 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 ADGRG3Q86Y34 549 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 OR5AK2Q8NH90 309 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 CCDC74AQ96AQ1 378 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 SLC7A5P2Q9GIP4 190 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 CHRNA9Q9UGM1 479 aa10□□□□□ -0.81
LINC00661-204ENST00000549354 LMX1BO60663 402 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 AKR7A3O95154 331 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 HIST1H2ABP04908 130 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 AP3S2P59780 193 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 FHL1Q13642 323 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 TAF13Q15543 124 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 SLC22A6Q4U2R8 563 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 HIST3H2AQ7L7L0 130 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 NPEPL1Q8NDH3 523 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 PTPMT1Q8WUK0 201 aaPredicted RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 HIST1H2ACQ93077 130 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 MFFQ9GZY8 342 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 NXF5Q9H1B4 397 aaKnown RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 OR10A5Q9H207 317 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 GPN1Q9HCN4 374 aaPredicted RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 NPDC1Q9NQX5 325 aaPredicted RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 FRRS1LQ9P0K9 344 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 ATMQ13315 3056 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 C13orf42A0A1B0GVH6 325 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 ITGA10O75578 1167 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 ZNF205O95201 554 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 IFNGR1P15260 489 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 TACR3P29371 465 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 NR0B2Q15466 257 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 CMIPQ8IY22 773 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 SAV1Q9H4B6 383 aaPredicted RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 DNAJB12Q9NXW2 375 aaKnown RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 SERTAD3Q9UJW9 196 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 MRTO4Q9UKD2 239 aaKnown RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 COL5A1P20908 1838 aaPredicted RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 A0A1B0GUH1 482 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 WNT11O96014 354 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 GAAP10253 952 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 DIO1P49895 249 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 PSMD4P55036 377 aaKnown RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 FMODQ06828 376 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 TMEM88Q6PEY1 159 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 GSG1LQ6UXU4 331 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 ZNF574Q6ZN55 896 aaPredicted RBP9.99□□□□□ -0.81
LINC00661-204ENST00000549354 OVCH1Q7RTY7 1134 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 IQCF2Q8IXL9 164 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 OR51A2Q8NGJ7 313 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 OR5D18Q8NGL1 313 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 SLC25A28Q96A46 364 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 G6PC3Q9BUM1 346 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 REG4Q9BYZ8 158 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 SLITRK2Q9H156 845 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 PRODH2Q9UF12 536 aa9.99□□□□□ -0.81
LINC00661-204ENST00000549354 ZNF407Q9C0G0 2248 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 RIF1Q5UIP0 2472 aaKnown RBP9.98□□□□□ -0.81
LINC00661-204ENST00000549354 CFAP47Q6ZTR5 3102 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 TGM6O95932 706 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 RORAP35398 523 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 PRKXP51817 358 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 HLA-BQ31612 363 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 RPL13AP3Q6NVV1 102 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 OR6V1Q8N148 313 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 EDAQ92838 391 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 NPAS1Q99742 590 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 ADAT1Q9BUB4 502 aaKnown RBP9.98□□□□□ -0.81
LINC00661-204ENST00000549354 JAM3Q9BX67 310 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 SEC61A2Q9H9S3 476 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 ELOVL3Q9HB03 270 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 ANKRD20A5PA0PJZ0 165 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 EEF1E1-BLOC1S5C9J1V9 151 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 ACOT7O00154 380 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 LAMTOR5O43504 91 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 ONECUT2O95948 504 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 IGKV3-11P04433 115 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 IL11P20809 199 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 MNDAP41218 407 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 CSRP2Q16527 193 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 SEZ6L2Q6UXD5 910 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 BCORP1Q8N888 145 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 METTL21AQ8WXB1 218 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 MAFIPQ8WZ33 124 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 SLC6A7Q99884 636 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 DPYSL5Q9BPU6 564 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 TAS2R5Q9NYW4 299 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 AKAP7Q9P0M2 348 aaPredicted RBP9.98□□□□□ -0.81
LINC00661-204ENST00000549354 OPN4Q9UHM6 478 aa9.98□□□□□ -0.81
LINC00661-204ENST00000549354 A0A1B0GV50 99 aa9.97□□□□□ -0.81
LINC00661-204ENST00000549354 A0A1B0GX78 115 aa9.97□□□□□ -0.81
LINC00661-204ENST00000549354 MFSD2BA6NFX1 497 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms