RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 GLO1Q04760 184 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 KLRB1Q12918 225 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 NFATC3Q12968 1075 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 SPHARQ15513 63 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 MED22Q15528 200 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 SSX1Q16384 188 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 PCK2Q16822 640 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 TIGD6Q17RP2 521 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 CDONQ4KMG0 1287 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 KRTCAP3Q53RY4 240 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 TSPO2Q5TGU0 170 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 NSUN5P2Q63ZY6 315 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF585AQ6P3V2 769 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF322Q6U7Q0 402 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 RPTNQ6XPR3 784 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 DPY19L4Q7Z388 723 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 P4HA3Q7Z4N8 544 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 GPR141Q7Z602 305 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 LINC00346Q8IVM7 164 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 GLB1L2Q8IW92 636 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 MCEMP1Q8IX19 187 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 GCNT2Q8N0V5 402 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 RPRMLQ8N4K4 120 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 KLHL36Q8N4N3 616 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 TEX19Q8NA77 164 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 OR52N1Q8NH53 320 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 OTOSQ8NHW6 89 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 FAM57AQ8TBR7 257 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 NABP1Q96AH0 204 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 INTS12Q96CB8 462 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 YIPF6Q96EC8 236 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 C4orf36Q96KX1 117 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 COG8Q96MW5 612 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 LINC00470Q9BZP3 86 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 SLCO5A1Q9H2Y9 848 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 GPR35Q9HC97 309 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 GP6Q9HCN6 339 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 VCX3AQ9NNX9 186 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 EMC7Q9NPA0 242 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 POLE4Q9NR33 117 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 SLC7A10Q9NS82 523 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 EMC3Q9P0I2 261 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 CAB39Q9Y376 341 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 FAM215AQ9Y5M1 114 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 CEPT1Q9Y6K0 416 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 RTTNQ86VV8 2226 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 MBD3L4A6NDZ8 208 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MBD3L3A6NE82 208 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MBD3L5A6NJ08 208 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 E9PI62 339 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF670-ZNF695F2Z2N8 137 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 H3BSA7 217 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 PSMD9O00233 223 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF593O00488 134 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 LRRTM2O43300 516 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 WDR1O75083 606 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MRPL33O75394 65 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 TOXO94900 526 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 IGHV3-9P01782 118 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 HRGP04196 525 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 SPARCP09486 303 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 NR2C1P13056 603 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 OR12D2P58182 307 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ROR2Q01974 943 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MLLT11Q13015 90 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ENDOGQ14249 297 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 KCNMB1Q16558 191 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 TSTQ16762 297 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 CEACAM16Q2WEN9 425 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 TP53I3Q53FA7 332 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ARMCX4Q5H9R4 360 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 TEX30Q5JUR7 227 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 C1orf185Q5T7R7 199 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 RIPPLY2Q5TAB7 128 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 CORO6Q6QEF8 472 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 SLC16A12Q6ZSM3 486 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 GPR137CQ8N3F9 429 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ZFP41Q8N8Y5 198 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 OR10S1Q8NGN2 331 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MBD3L2Q8NHZ7 208 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ST7LQ8TDW4 575 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 PELI1Q96FA3 418 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 GMPPAQ96IJ6 420 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MNTQ99583 582 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MGLLQ99685 303 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 C12orf49Q9H741 205 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 CRLF2Q9HC73 371 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ISYNA1Q9NPH2 558 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 CHCHD3Q9NX63 227 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 PRSS50Q9UI38 385 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 MRM2Q9UI43 246 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 LAMP5Q9UJQ1 280 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF835Q9Y2P0 537 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 LHFPL6Q9Y693 200 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 SIRT4Q9Y6E7 314 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 COL6A6A6NMZ7 2263 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 PIEZO2Q9H5I5 2752 aa7.12□□□□□ -1.27
DEPDC4-207ENST00000549249 PNMA8CA0A1B0GUJ8 204 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms