RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 BMP2P12643 396 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 MDKP21741 143 aaPredicted RBP11.44□□□□□ -0.58
CDX2-202ENST00000548877 CSNK1A1P48729 337 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 MMP15P51511 669 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 ERVS71-1P61550 626 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 HOXC5Q00444 222 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 PUDPQ08623 228 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 SELPLGQ14242 412 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 NRN1LQ496H8 165 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 IZUMO2Q6UXV1 221 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 WDR88Q6ZMY6 472 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 ADGRG5Q8IZF4 528 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 PACRGLQ8N7B6 248 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 OR1J2Q8NGS2 313 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 ST7LQ8TDW4 575 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 CANT1Q8WVQ1 401 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 FAM162AQ96A26 154 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 TMIGD2Q96BF3 282 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 CENPNQ96H22 339 aaPredicted RBP11.44□□□□□ -0.58
CDX2-202ENST00000548877 RSPO3Q9BXY4 272 aaPredicted RBP11.44□□□□□ -0.58
CDX2-202ENST00000548877 MAGIXQ9H6Y5 334 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 MMP26Q9NRE1 261 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 SLC6A13Q9NSD5 602 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 GLTPQ9NZD2 209 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 RPS6KB2Q9UBS0 482 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 RPS6KA6Q9UK32 745 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 SAMD4AQ9UPU9 718 aaKnown RBP11.44□□□□□ -0.58
CDX2-202ENST00000548877 AURKCQ9UQB9 309 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 INSIG2Q9Y5U4 225 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 TCRBV5S2A0A599 114 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 PLPP3O14495 311 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 IGHV1-46P01743 117 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 LCKP06239 509 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 MAKP20794 623 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 HTR2AP28223 471 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 ZNF81P51508 661 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 PMS2P3Q13401 168 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 TSTQ16762 297 aaKnown RBP11.43□□□□□ -0.58
CDX2-202ENST00000548877 ALG10BQ5I7T1 473 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 RPS26P11Q5JNZ5 115 aaPredicted RBP11.43□□□□□ -0.58
CDX2-202ENST00000548877 INTS11Q5TA45 600 aaKnown RBP11.43□□□□□ -0.58
CDX2-202ENST00000548877 C16orf87Q6PH81 154 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 ULK3Q6PHR2 472 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
CDX2-202ENST00000548877 OR6X1Q8NH79 312 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 WFDC12Q8WWY7 111 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 CCL17Q92583 94 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 GTF3AQ92664 365 aaKnown RBP11.43□□□□□ -0.58
CDX2-202ENST00000548877 EME1Q96AY2 570 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 EPYCQ99645 322 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 PKP2Q99959 881 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 ASPNQ9BXN1 380 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 MMP27Q9H306 513 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 PRDM13Q9H4Q3 707 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 CACYBPQ9HB71 228 aaKnown RBP11.43□□□□□ -0.58
CDX2-202ENST00000548877 CDH20Q9HBT6 801 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 TMEM38BQ9NVV0 291 aa11.43□□□□□ -0.58
CDX2-202ENST00000548877 TESQ9UGI8 421 aaKnown RBP11.43□□□□□ -0.58
CDX2-202ENST00000548877 TPD52L2O43399 206 aaKnown RBP11.42□□□□□ -0.58
CDX2-202ENST00000548877 IFNA14P01570 189 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 IGHV2-70P01814 119 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 CD55P08174 381 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 CCL2P13500 99 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 CBLP22681 906 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 PEX2P28328 305 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 PRKAR1BP31321 381 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 LIPAP38571 399 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 CRATP43155 626 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 MTNR1AP48039 350 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 SLC6A9P48067 706 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 GZMMP51124 257 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 PAX8Q06710 450 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 TBC1D28Q2M2D7 210 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 VMACQ2NL98 169 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 GTDC1Q4AE62 458 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 ZNF362Q5T0B9 420 aaPredicted RBP11.42□□□□□ -0.58
CDX2-202ENST00000548877 TMEM53Q6P2H8 277 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 LRFN4Q6PJG9 635 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 C11orf65Q8NCR3 313 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 SLCO4A1Q96BD0 722 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 SLC47A1Q96FL8 570 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 MOGAT1Q96PD6 335 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 CITED1Q99966 193 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 C9orf16Q9BUW7 83 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 IKZF5Q9H5V7 419 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 PATZ1Q9HBE1 687 aaKnown RBP11.42□□□□□ -0.58
CDX2-202ENST00000548877 DCAF13Q9NV06 445 aaKnown RBP11.42□□□□□ -0.58
CDX2-202ENST00000548877 PDP1Q9P0J1 537 aaPredicted RBP11.42□□□□□ -0.58
CDX2-202ENST00000548877 CGGBP1Q9UFW8 167 aaPredicted RBP11.42□□□□□ -0.58
CDX2-202ENST00000548877 KLHL21Q9UJP4 597 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 NPTNQ9Y639 398 aa11.42□□□□□ -0.58
CDX2-202ENST00000548877 TMEM247A6NEH6 219 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 F5H0A9 414 aaPredicted RBP11.41□□□□□ -0.58
CDX2-202ENST00000548877 DHHO43323 396 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 FARS2O95363 451 aaKnown RBP11.41□□□□□ -0.58
CDX2-202ENST00000548877 ETS2P15036 469 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 NCK1P16333 377 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 PCGF2P35227 344 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 RGNQ15493 299 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 ATP6AP1Q15904 470 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms