RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TUBG2Q9NRH3 451 aa8□□□□□ -1.13
YBX3-218ENST00000546298 TREM2Q9NZC2 230 aa8□□□□□ -1.13
YBX3-218ENST00000546298 CGGBP1Q9UFW8 167 aaPredicted RBP8□□□□□ -1.13
YBX3-218ENST00000546298 SAMD4AQ9UPU9 718 aaKnown RBP8□□□□□ -1.13
YBX3-218ENST00000546298 ZNF469Q96JG9 3925 aaPredicted RBP7.99□□□□□ -1.13
YBX3-218ENST00000546298 LOC100509620A0A075B734 347 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 IGHV1-69-2A0A0G2JMI3 117 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 A0A1W2PRQ8 180 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 PRSS37A4D1T9 235 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 CDC14BO60729 498 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 KHDRBS3O75525 346 aaKnown RBP7.99□□□□□ -1.13
YBX3-218ENST00000546298 RP2O75695 350 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 NCR1O76036 304 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 PRSS23O95084 383 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 NDUFB2O95178 105 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 COX5BP10606 129 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 ITGA2P17301 1181 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 CR1P17927 2039 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 RHCEP18577 417 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 GSTM3P21266 225 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 GPR4P46093 362 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 SMIM11AP58511 58 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 PPP1CBP62140 327 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 GLO1Q04760 184 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 SLC3A1Q07837 685 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 SCRN3Q0VDG4 424 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 DGCR6Q14129 220 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 HFEQ30201 348 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 MBNL2Q5VZF2 373 aaKnown RBP7.99□□□□□ -1.13
YBX3-218ENST00000546298 TBPL2Q6SJ96 375 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 USP51Q70EK9 711 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 TREML1Q86YW5 311 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 ZNF101Q8IZC7 436 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 RFLNBQ8N5W9 214 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 OR51F2Q8NH61 342 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 ABHD4Q8TB40 342 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 KLF14Q8TD94 323 aaPredicted RBP7.99□□□□□ -1.13
YBX3-218ENST00000546298 RAB1CQ92928 201 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 TMEM186Q96B77 213 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 RAB39BQ96DA2 213 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 MARS2Q96GW9 593 aaKnown RBP7.99□□□□□ -1.13
YBX3-218ENST00000546298 C4orf45Q96LM5 186 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 COG8Q96MW5 612 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 ZNF570Q96NI8 536 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 DIRC2Q96SL1 478 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 EGLN1Q9GZT9 426 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 NSRP1Q9H0G5 558 aaKnown RBP7.99□□□□□ -1.13
YBX3-218ENST00000546298 WNT5BQ9H1J7 359 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 NARFLQ9H6Q4 476 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 SAP30LQ9HAJ7 183 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 ADA2Q9NZK5 511 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 GMPR2Q9P2T1 348 aaKnown RBP7.99□□□□□ -1.13
YBX3-218ENST00000546298 ABCD2Q9UBJ2 740 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 AURKCQ9UQB9 309 aa7.99□□□□□ -1.13
YBX3-218ENST00000546298 ATRQ13535 2644 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 TRAV20A0A0B4J274 112 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 CLDN25C9JDP6 229 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 CDC42EP2O14613 210 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 SGCEO43556 437 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 TCF21O43680 179 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ICMTO60725 284 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 PTP4A3O75365 173 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ABHD16AO95870 558 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 MSMBP08118 114 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ADH4P08319 380 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 GAAP10253 952 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 NCK1P16333 377 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 WNT5AP41221 380 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 LMO4P61968 165 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 MVKQ03426 396 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 FHL1Q13642 323 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ENDOGQ14249 297 aaKnown RBP7.98□□□□□ -1.13
YBX3-218ENST00000546298 TSTQ16762 297 aaKnown RBP7.98□□□□□ -1.13
YBX3-218ENST00000546298 FGD3Q5JSP0 725 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 SPATA46Q5T0L3 261 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ACSM5Q6NUN0 579 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ZNF774Q6NX45 483 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 SHQ1Q6PI26 577 aaKnown RBP7.98□□□□□ -1.13
YBX3-218ENST00000546298 PEG10Q86TG7 708 aaKnown RBP7.98□□□□□ -1.13
YBX3-218ENST00000546298 ADCK1Q86TW2 530 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 MEX3DQ86XN8 651 aaKnown RBP7.98□□□□□ -1.13
YBX3-218ENST00000546298 CLDN22Q8N7P3 220 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 NPEPL1Q8NDH3 523 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 SLC25A40Q8TBP6 338 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 SLC7A13Q8TCU3 470 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 MCUR1Q96AQ8 359 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 Q96M85 177 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 OR2J1Q9GZK6 312 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 MYLK2Q9H1R3 596 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 DCAF13Q9NV06 445 aaKnown RBP7.98□□□□□ -1.13
YBX3-218ENST00000546298 TBCCD1Q9NVR7 557 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 HIF1ANQ9NWT6 349 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 NDUFAF4Q9P032 175 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ZDHHC8Q9ULC8 765 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 ADAM18Q9Y3Q7 739 aa7.98□□□□□ -1.13
YBX3-218ENST00000546298 A0A0A6YYJ9 748 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 TEX13CA0A0J9YWL9 993 aa7.97□□□□□ -1.13
YBX3-218ENST00000546298 UNC119BA6NIH7 251 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms