RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 AHSA2Q719I0 299 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 LINGO2Q7L985 606 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 BCDIN3DQ7Z5W3 292 aaKnown RBP14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 KCTD20Q7Z5Y7 419 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 CDC20BQ86Y33 519 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 ERI1Q8IV48 349 aaKnown RBP14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 SVOPQ8N4V2 548 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF433Q8N7K0 673 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 GJC3Q8NFK1 279 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 STEAP2Q8NFT2 490 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 OR51L1Q8NGJ5 315 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 OR52I1Q8NGK6 324 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 C11orf40Q8WZ69 217 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 CDADC1Q9BWV3 514 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 SLC5A6Q9Y289 635 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 A0A087WXM4 84 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 TMEM129A0AVI4 362 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 GNLYP22749 145 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 IGHV1-2P23083 117 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 EDNRAP25101 427 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 ARF1P84077 181 aaKnown RBP14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 EGR3Q06889 387 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 ECH1Q13011 328 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 SLC35F2Q8IXU6 374 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 SYS1Q8N2H4 156 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 FAM169BQ8N8A8 192 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF610Q8N9Z0 462 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF511Q8NB15 262 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 OR6N2Q8NGY6 317 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 OR2AJ1Q8NGZ0 328 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 LILRB4Q8NHJ6 448 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNRF4Q8WWF5 429 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 CCDC120Q96HB5 630 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 C1orf198Q9H425 327 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 NIPAL2Q9H841 368 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 VCX3AQ9NNX9 186 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 AMBNQ9NP70 447 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 AASSQ9UDR5 926 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 LAMP5Q9UJQ1 280 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 POLR1DQ9Y2S0 133 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 SNX5Q9Y5X3 404 aa14.06□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF593O00488 134 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 LRRTM2O43300 516 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF254O75437 659 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 SULT1C4O75897 302 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 IGHV3-9P01782 118 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 LYNP07948 512 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 B4GALT1P15291 398 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 ALOX5APP20292 161 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 DCTDP32321 178 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 ARR3P36575 388 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 CD79BP40259 229 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 HIST1H3AP68431 136 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 ROM1Q03395 351 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 TBCEQ15813 527 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 GABRA6Q16445 453 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 SGCAQ16586 387 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 HIST2H3PS2Q5TEC6 136 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF773Q6PK81 442 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 KLHL24Q6TFL4 600 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 PLEKHG7Q6ZR37 379 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 HIST2H3AQ71DI3 136 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 SLC16A14Q7RTX9 510 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 DPY19L4Q7Z388 723 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 FJX1Q86VR8 437 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 OR52N1Q8NH53 320 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 PRR7Q8TB68 274 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 FCGR1BQ92637 280 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 BCL2L2Q92843 193 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF416Q9BWM5 594 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 HDHD2Q9H0R4 259 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 OPN3Q9H1Y3 402 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 ERGIC3Q9Y282 383 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 AMDHD2Q9Y303 409 aa14.05□□□□□ -0.16
PRPF40A-212ENST00000545856 CIB4A0PJX0 185 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 TRIM64CA6NLI5 447 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 EEF1E1-BLOC1S5C9J1V9 151 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 PTGES3LE9PB15 166 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 EEF1E1O43324 174 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 WNT11O96014 354 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 APOC1P02654 83 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 COX5BP10606 129 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 ADORA2A-AS1P86434 159 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 SORDQ00796 357 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 GALEQ14376 348 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 C3orf36Q3SXR2 165 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 TBRG1Q3YBR2 411 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 TMEM53Q6P2H8 277 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF474Q6S9Z5 364 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 TMPRSS11AQ6ZMR5 421 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 ALDH16A1Q8IZ83 802 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 RELL2Q8NC24 303 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 OR10H4Q8NGA5 316 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 OR4F15Q8NGB8 312 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF837Q96EG3 531 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 MND1Q9BWT6 205 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 DDX28Q9NUL7 540 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms