RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	AKR7L	Q8NHP1	331 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RHEBL1	Q8TAI7	183 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MRAP	Q8TCY5	172 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPR151	Q8TDV0	419 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	C16orf78	Q8WTQ4	265 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SELENOM	Q8WWX9	145 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	AMDHD1	Q96NU7	426 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MS4A10	Q96PG2	267 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DIRC2	Q96SL1	478 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RBBP8	Q99708	897 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MRPL37	Q9BZE1	423 aa	Known RBP	4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ELOVL6	Q9H5J4	265 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	LZTFL1	Q9NQ48	299 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	EQTN	Q9NQ60	294 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MRPS18A	Q9NVS2	196 aa	Known RBP	4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KLHL14	Q9P2G3	628 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	VPS29	Q9UBQ0	182 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UPB1	Q9UBR1	384 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KLHL21	Q9UJP4	597 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GUCA1B	Q9UMX6	200 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FLVCR1	Q9Y5Y0	555 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SOX21	Q9Y651	276 aa	Predicted RBP	4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PLXNB1	O43157	2135 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DNAH1	Q9P2D7	4330 aa		4.1	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HERC2	O95714	4834 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PPIAL4E	A0A075B759	164 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PPIAL4C	A0A0B4J2A2	164 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR6C65	A6NJZ3	312 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PPIAL4D	F5H284	164 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660		M0R233	179 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NR5A2	O00482	541 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PPP6C	O00743	305 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PCDH7	O60245	1069 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SCAF4	O95104	1147 aa	Known RBP	4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NDUFA7	O95182	113 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FGF4	P08620	206 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IFI6	P09912	130 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PPIAL4F	P0DN26	164 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ACP2	P11117	423 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PRPS2	P11908	318 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PAX7	P23759	505 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TIA1	P31483	386 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CAPG	P40121	348 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ALDH3B1	P43353	468 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RAG2	P55895	527 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ERVFRD-1	P60508	538 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ACTR3	P61158	418 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TUBA1B	P68363	451 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TUBA4A	P68366	448 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CSNK2A1	P68400	391 aa	Predicted RBP	4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	H3F3A	P84243	136 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FHL3	Q13643	280 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HLX	Q14774	488 aa	Predicted RBP	4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC17A1	Q14916	467 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KIR3DS1	Q14943	382 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	QPRT	Q15274	297 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DUSP5	Q16690	384 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NDUFAF6	Q330K2	333 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	VPS26B	Q4G0F5	336 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TIGD2	Q4W5G0	525 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SYT14P1	Q58G82	188 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TMEM41B	Q5BJD5	291 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CCNJ	Q5T5M9	372 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	AVPI1	Q5T686	147 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RUSC1-AS1	Q66K80	236 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TUBA1A	Q71U36	451 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ADGRG3	Q86Y34	549 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	WDFY1	Q8IWB7	410 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MMGT1	Q8N4V1	131 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ARFGAP2	Q8N6H7	521 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SETD9	Q8NE22	299 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FBXO36	Q8NEA4	188 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR4F6	Q8NGB9	312 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR1K1	Q8NGR3	316 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR4F5	Q8NH21	305 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR5W2	Q8NH69	310 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PIGX	Q8TBF5	258 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	POP5	Q969H6	163 aa	Known RBP	4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RAB39B	Q96DA2	213 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	AJUBA	Q96IF1	538 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MS4A14	Q96JA4	679 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ARL5B	Q96KC2	179 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPR78	Q96P69	363 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SHCBP1L	Q9BZQ2	653 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KCNK15	Q9H427	330 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PALMD	Q9NP74	551 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PARPBP	Q9NWS1	579 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLCO1C1	Q9NYB5	712 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TAS2R7	Q9NYW3	318 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	C1RL	Q9NZP8	487 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF225	Q9UK10	706 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PCTP	Q9UKL6	214 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MAB21L2	Q9Y586	359 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660		U3KQE9	123 aa		4.09	□□□□□ -1.75
NPIPB4-219	ENST00000543660	STAB2	Q8WWQ8	2551 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GNG14	A0A1W2PPG7	69 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C5orf63	A6NC05	138 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms