RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	WARS2	Q9UGM6	360 aa	Known RBP	8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	RAB26	Q9ULW5	256 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	TIMM10B	Q9Y5J6	103 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC25A15	Q9Y619	301 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	HSPE1-MOB4	S4R3N1	261 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	PHF3	Q92576	2039 aa	Known RBP	8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	ARPC4-TTLL3	A0A0A6YYG9	625 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	CCDC182	A6NF36	153 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545		M0R1B8	84 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SELENOF	O60613	162 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	CLDN1	O95832	211 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	HRG	P04196	525 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	COX6B1	P14854	86 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	CBR1	P16152	277 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF32	P17041	273 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC2A5	P22732	501 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	IDH3G	P51553	393 aa	Predicted RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	NUDT6	P53370	316 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	ISL1	P61371	349 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SCRN3	Q0VDG4	424 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	AQP6	Q13520	282 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	ENDOG	Q14249	297 aa	Known RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	KCNMB1	Q16558	191 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC25A30	Q5SVS4	291 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SP5	Q6BEB4	398 aa	Predicted RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	KRT80	Q6KB66	452 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	CORO6	Q6QEF8	472 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	C22orf34	Q6ZV56	151 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	USP51	Q70EK9	711 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SHF	Q7M4L6	423 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SSX8	Q7RTT4	187 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	DMRTC2	Q8IXT2	367 aa	Predicted RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	ALDH16A1	Q8IZ83	802 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	FBXO17	Q96EF6	278 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	RNFT2	Q96EX2	444 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	DACH2	Q96NX9	599 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	CNN2	Q99439	309 aa	Known RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC24A3	Q9HC58	644 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	AMBN	Q9NP70	447 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	MRPL22	Q9NWU5	206 aa	Known RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	CRIM1	Q9NZV1	1036 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	ASH2L	Q9UBL3	628 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	KCNG2	Q9UJ96	466 aa		8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	RPL36	Q9Y3U8	105 aa	Known RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	INTS1	Q8N201	2190 aa	Known RBP	8.87	□□□□□ -0.99
CPSF7-221	ENST00000543545	RELN	P78509	3460 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	IQCM	A0A1B0GVH7	501 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	RER1	O15258	196 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	APOL3	O95236	402 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	THBD	P07204	575 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	EPX	P11678	715 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	GABRB1	P18505	474 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	PAX7	P23759	505 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	RPS27	P42677	84 aa	Known RBP	8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	MTNR1A	P48039	350 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	POU4F2	Q12837	409 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	CDK5R2	Q13319	367 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	TMED1	Q13445	227 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	EIF2B1	Q14232	305 aa	Known RBP	8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	RAB39A	Q14964	217 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	TAF13	Q15543	124 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	SMN1	Q16637	294 aa	Known RBP	8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	PABPC1L2A	Q5JQF8	200 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	C1QTNF12	Q5T7M4	302 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC18B1	Q6NT16	456 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF774	Q6NX45	483 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	SPATC1	Q76KD6	591 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC16A9	Q7RTY1	509 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	DPY19L4	Q7Z388	723 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	DCXR	Q7Z4W1	244 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	SYT9	Q86SS6	491 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	GJC3	Q8NFK1	279 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	BPIFB6	Q8NFQ5	453 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	OR51G2	Q8NGK0	314 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	AKR7L	Q8NHP1	331 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	FAM222B	Q8WU58	562 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	SMAP2	Q8WU79	429 aa	Predicted RBP	8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	THEM6	Q8WUY1	208 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	BOD1	Q96IK1	185 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	KCNS3	Q9BQ31	491 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	WAC	Q9BTA9	647 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	ANKRD60	Q9BZ19	345 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	OR2H1	Q9GZK4	316 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	MOV10	Q9HCE1	1003 aa	Known RBP	8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	CENPM	Q9NSP4	180 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	B3GNT2	Q9NY97	397 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	PLEK2	Q9NYT0	353 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	LAMP5	Q9UJQ1	280 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	LHFPL6	Q9Y693	200 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	COMMD3-BMI1	R4GMX3	469 aa		8.86	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF503-AS2	A6NEH8	195 aa		8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	SGCE	O43556	437 aa		8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	DOK2	O60496	412 aa		8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	FAM20B	O75063	409 aa		8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	WBP4	O75554	376 aa	Known RBP	8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	PTH	P01270	115 aa		8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	MMP7	P09237	267 aa	Predicted RBP	8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	CCNO	P22674	350 aa		8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	MYF6	P23409	242 aa		8.85	□□□□□ -0.99
CPSF7-221	ENST00000543545	APLNR	P35414	380 aa		8.85	□□□□□ -0.99

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms