RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 HLA-HP01893 362 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 SERPINA5P05154 406 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 MMP7P09237 267 aaPredicted RBP10.62□□□□□ -0.71
DDX55-210ENST00000543016 COX5BP10606 129 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 SLC2A5P22732 501 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 GSTT1P30711 240 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 PYCR1P32322 319 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 CAPGP40121 348 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 VHLP40337 213 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 ADARB1P78563 741 aaKnown RBP10.62□□□□□ -0.71
DDX55-210ENST00000543016 ENDOGQ14249 297 aaKnown RBP10.62□□□□□ -0.71
DDX55-210ENST00000543016 PCK2Q16822 640 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 KLHL12Q53G59 568 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 SEZ6L2Q6UXD5 910 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 C22orf34Q6ZV56 151 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 SHFQ7M4L6 423 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 MDP1Q86V88 176 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 LRRC18Q8N456 261 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 ZNF454Q8N9F8 522 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 GJC3Q8NFK1 279 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 OR1J2Q8NGS2 313 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 OR6K6Q8NGW6 343 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 OR2AJ1Q8NGZ0 328 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 RHOXF1Q8NHV9 184 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 CYGBQ8WWM9 190 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 ZC3HAV1LQ96H79 300 aaKnown RBP10.62□□□□□ -0.71
DDX55-210ENST00000543016 IL4I1Q96RQ9 567 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 MNTQ99583 582 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 TEAD3Q99594 435 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 ZNF224Q9NZL3 707 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 CYB5R1Q9UHQ9 305 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 ATPIF1Q9UII2 106 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 POLR1DQ9Y2S0 133 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 FAM221AA4D161 298 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 A6NNC1 897 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 TFP02787 698 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 GYPBP06028 91 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 ZNF32P17041 273 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 SSTR2P30874 369 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 HTR1FP30939 366 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 ENTPD1P49961 510 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 RPS7P62081 194 aaKnown RBP10.61□□□□□ -0.71
DDX55-210ENST00000543016 HIST1H3AP68431 136 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 ADAM8P78325 824 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 POU4F2Q12837 409 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 ECH1Q13011 328 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 GGTLC2Q14390 218 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 NCMAPQ5T1S8 102 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 HIST2H3PS2Q5TEC6 136 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 ZNF691Q5VV52 312 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 HIST2H3AQ71DI3 136 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 RHOUQ7L0Q8 258 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 TFAP2CQ92754 450 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 FBXO17Q96EF6 278 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 INTS14Q96SY0 518 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 HCAR1Q9BXC0 346 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 MED20Q9H944 212 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 EMC7Q9NPA0 242 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 MRPL22Q9NWU5 206 aaKnown RBP10.61□□□□□ -0.71
DDX55-210ENST00000543016 CLN6Q9NWW5 311 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 TMEM14AQ9Y6G1 99 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 COMMD3-BMI1R4GMX3 469 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 TENM4Q6N022 2769 aa10.61□□□□□ -0.71
DDX55-210ENST00000543016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.6□□□□□ -0.71
DDX55-210ENST00000543016 FAM171A2A8MVW0 826 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 DEFB108AA8MXU0 73 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ZNF593O00488 134 aaPredicted RBP10.6□□□□□ -0.71
DDX55-210ENST00000543016 SGCEO43556 437 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 MPZL1O95297 269 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 CRYAAP02489 173 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 CD3EP07766 207 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 CLUP10909 449 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ZNF14P17017 642 aaPredicted RBP10.6□□□□□ -0.71
DDX55-210ENST00000543016 GABRB1P18505 474 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 CD40P25942 277 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ZNF83P51522 516 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 CDH11P55287 796 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 PSG4Q00888 419 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 PIGFQ07326 219 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 APOFQ13790 326 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 SNTB1Q13884 538 aaKnown RBP10.6□□□□□ -0.71
DDX55-210ENST00000543016 SNCBQ16143 134 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 UGT2A3Q6UWM9 527 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 UNQ6126/PRO20091Q6UXV3 157 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 TIGD4Q8IY51 512 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 C1orf174Q8IYL3 243 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 OR51L1Q8NGJ5 315 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ZNF75AQ96N20 296 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ZNF582Q96NG8 517 aaPredicted RBP10.6□□□□□ -0.71
DDX55-210ENST00000543016 MYCBPQ99417 103 aaPredicted RBP10.6□□□□□ -0.71
DDX55-210ENST00000543016 KCNS3Q9BQ31 491 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 OR2H1Q9GZK4 316 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 YIPF3Q9GZM5 350 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 HDHD2Q9H0R4 259 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 NPAP1Q9NZP6 1156 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ASH2LQ9UBL3 628 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 PCDHGB1Q9Y5G3 927 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 ABCA4P78363 2273 aa10.6□□□□□ -0.71
DDX55-210ENST00000543016 A0A1W2PR80 420 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms