RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 IFT27Q9BW83 186 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 RACGAP1Q9H0H5 632 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 WNT5BQ9H1J7 359 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 LRMDAQ9H2I8 198 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 CDH20Q9HBT6 801 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 TIMM10BQ9Y5J6 103 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 U3KQV3 271 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 ABCA2Q9BZC7 2435 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 IGLV1-36A0A0B4J1U3 117 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 SLC16A7O60669 478 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 CST1P01037 141 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 GASTP01350 101 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 CSF3P09919 207 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 GAAP10253 952 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 HIST1H1CP16403 213 aaKnown RBP11.28□□□□□ -0.6
LTBR-208ENST00000541005 APLNRP35414 380 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 DSCR9P59020 149 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 SCRN3Q0VDG4 424 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 AQP6Q13520 282 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 DNM1P34Q6PK57 102 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 UGT2A3Q6UWM9 527 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 ZBTB46Q86UZ6 589 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 JAZF1Q86VZ6 243 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 SPATA24Q86W54 205 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 SVOPLQ8N434 492 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 OR10H5Q8NGA6 315 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 SORCS2Q96PQ0 1159 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
LTBR-208ENST00000541005 PLA2G12AQ9BZM1 189 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 NUAK2Q9H093 628 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 MMADHCQ9H3L0 296 aaPredicted RBP11.28□□□□□ -0.6
LTBR-208ENST00000541005 EGLN3Q9H6Z9 239 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 EMC7Q9NPA0 242 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
LTBR-208ENST00000541005 IGLV3-9A0A075B6K5 115 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 LOC100509620A0A075B734 347 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 FAM171A2A8MVW0 826 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 DCTN6O00399 190 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 SSX4O60224 188 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 FKBP6O75344 327 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
LTBR-208ENST00000541005 RENP00797 406 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 TP53P04637 393 aaPredicted RBP11.27□□□□□ -0.61
LTBR-208ENST00000541005 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.61
LTBR-208ENST00000541005 COX5BP10606 129 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 CCL2P13500 99 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 ZNF250P15622 560 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 UCP2P55851 309 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 PPP1R8Q12972 351 aaKnown RBP11.27□□□□□ -0.61
LTBR-208ENST00000541005 LEG1Q6P5S2 330 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 CLEC2AQ6UVW9 174 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 ALDH16A1Q8IZ83 802 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 OR6V1Q8N148 313 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 LNX2Q8N448 690 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 NPEPL1Q8NDH3 523 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 OR10G2Q8NGC3 310 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 OR8D4Q8NGM9 314 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 OR4K13Q8NH42 304 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 AKR7LQ8NHP1 331 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 GIPC3Q8TF64 312 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 NMNAT3Q96T66 252 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 DDOQ99489 341 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
LTBR-208ENST00000541005 ATPIF1Q9UII2 106 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 BAIAP2Q9UQB8 552 aa11.27□□□□□ -0.61
LTBR-208ENST00000541005 COA3Q9Y2R0 106 aaPredicted RBP11.27□□□□□ -0.61
LTBR-208ENST00000541005 A0A096LNT2 108 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 OR6C68A6NDL8 312 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 H3BSA7 217 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 M0R233 179 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 SYNGR3O43761 229 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 FAM157BP0CG42 384 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 NOS3P29474 1203 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 WNT5AP41221 380 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 RAD52P43351 418 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 GDI2P50395 445 aaKnown RBP11.26□□□□□ -0.61
LTBR-208ENST00000541005 GLO1Q04760 184 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.26□□□□□ -0.61
LTBR-208ENST00000541005 COX10Q12887 443 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 CLEC12AQ5QGZ9 265 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 RGS7BPQ6MZT1 257 aaPredicted RBP11.26□□□□□ -0.61
LTBR-208ENST00000541005 ZNF774Q6NX45 483 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 VASH1Q7L8A9 365 aaPredicted RBP11.26□□□□□ -0.61
LTBR-208ENST00000541005 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 ZNF525Q8N782 197 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 SLC26A10Q8NG04 563 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 C11orf40Q8WZ69 217 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 SLCO4A1Q96BD0 722 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 TSSK2Q96PF2 358 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 FEVQ99581 238 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 REG4Q9BYZ8 158 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 RAB1BQ9H0U4 201 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 TBC1D23Q9NUY8 699 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 DNAJB9Q9UBS3 223 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 NDRG4Q9ULP0 352 aaKnown RBP11.26□□□□□ -0.61
LTBR-208ENST00000541005 B9D1Q9UPM9 204 aa11.26□□□□□ -0.61
LTBR-208ENST00000541005 IGHV4-30-2A0A087WSY4 118 aa11.25□□□□□ -0.61
LTBR-208ENST00000541005 C5orf49A4QMS7 147 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms