RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 LIPNQ5VXI9 398 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 SLC18B1Q6NT16 456 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 CEACAM19Q7Z692 300 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 FGD2Q7Z6J4 655 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 TPRA1Q86W33 373 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 LAX1Q8IWV1 398 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 YIPF7Q8N8F6 280 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF454Q8N9F8 522 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 NOXO1Q8NFA2 376 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 OR13C5Q8NGS8 318 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 PHYHIPQ92561 330 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 CEP19Q96LK0 163 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 OR8B4Q96RC9 309 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 AMELYQ99218 206 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 SLC30A2Q9BRI3 323 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 TTYH2Q9BSA4 534 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 IKZF2Q9UKS7 526 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 RASD1Q9Y272 281 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 COA3Q9Y2R0 106 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 SHANK1Q9Y566 2161 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 CFAP46Q8IYW2 2715 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 SMIM30A4D0T7 59 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 RGS5O15539 181 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 EIF1BO60739 113 aaKnown RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 RAMP1O60894 148 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 UPK1BO75841 260 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 GATBO75879 557 aaKnown RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ACTL6AO96019 429 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 IGHG1P01857 330 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 HRGP04196 525 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 SPARCP09486 303 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 UCHL1P09936 223 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 PGA4P0DJD7 388 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 PGA3P0DJD8 388 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 KLK2P20151 261 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 POU3F2P20265 443 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 RPS27P42677 84 aaKnown RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 CAV3P56539 151 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 CSNK2A1P68400 391 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ADAM8P78325 824 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 IFITM3Q01628 133 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 POU4F3Q15319 338 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 BCL2A1Q16548 175 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 RGS21Q2M5E4 152 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 PRR30Q53SZ7 412 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 YIF1BQ5BJH7 314 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 FAM27D1Q5T7N8 215 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 DDI2Q5TDH0 399 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 FDX2Q6P4F2 183 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 OR6X1Q8NH79 312 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 CHPT1Q8WUD6 406 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 THEM6Q8WUY1 208 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 HSD17B8Q92506 261 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 WBP1Q96G27 269 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 SLC25A44Q96H78 314 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 MAP6Q96JE9 813 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 FOXN4Q96NZ1 517 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 PDCD1LG2Q9BQ51 273 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 EMC6Q9BV81 110 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 MIXL1Q9H2W2 232 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF281Q9Y2X9 895 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 CACNA1BQ00975 2339 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 IGKV1D-43A0A0B4J1Z2 117 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 TRAV1-2A0A0B4J238 106 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 LOC110117498-PIK3R3F6TDL0 507 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 AQP7O14520 342 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 TNFSF11O14788 317 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ARL6IP5O75915 188 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 NCR1O76036 304 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ZFPL1O95159 310 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 VAMP5O95183 116 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
SMAD3-204ENST00000540846 CPN1P15169 458 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF43P17038 809 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 KLRB1Q12918 225 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ALKBH1Q13686 389 aaKnown RBP11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF181Q2M3W8 571 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 THEM4Q5T1C6 240 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 HBMQ6B0K9 141 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 TMEM225Q6GV28 225 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 UNQ9370/PRO34162Q6UXP9 181 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 Q6ZNX1 250 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ESPNLQ6ZVH7 1005 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 GPAT4Q86UL3 456 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 GLB1L2Q8IW92 636 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 OR2G2Q8NGZ5 317 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 RGP1Q92546 391 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ABTB1Q969K4 478 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-204ENST00000540846 GPR137Q96N19 417 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ATF6BQ99941 703 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 SLX1AQ9BQ83 275 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 SRXN1Q9BYN0 137 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 SLCO1C1Q9NYB5 712 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 KLHL9Q9P2J3 617 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ING1Q9UK53 422 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-204ENST00000540846 V9GYH0 126 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 ZFYVE26Q68DK2 2539 aa11.06□□□□□ -0.64
SMAD3-204ENST00000540846 A0A0G2JK05 382 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 OR4C45A6NMZ5 311 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms