RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 IL34Q6ZMJ4 242 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 MISPQ8IVT2 679 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 TEX19Q8NA77 164 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 UBAC2Q8NBM4 344 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 HS6ST2Q96MM7 605 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 SPSB2Q99619 263 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 GPA33Q99795 319 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 SUCNR1Q9BXA5 334 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 METTL8Q9H825 291 aaKnown RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 WIF1Q9Y5W5 379 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 COL6A6A6NMZ7 2263 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 TMEM229AB2RXF0 380 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 PSMD9O00233 223 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 PEX12O00623 359 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 ERI3O43414 337 aaKnown RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 CDC40O60508 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
DDB1-217ENST00000540166 IGHA1P01876 353 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 SBK2P0C263 348 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 GLB1P16278 677 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 AKR1C4P17516 323 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 PAX6P26367 422 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 CDK3Q00526 305 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 ECH1Q13011 328 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 SKP2Q13309 424 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 HYAL4Q2M3T9 481 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 ALG11Q2TAA5 492 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 PLEKHN1Q494U1 663 aaPredicted RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 ACTBL2Q562R1 376 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 NIPAL3Q6P499 406 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 OR10D4PQ8NGN7 298 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 OR5AR1Q8NGP9 310 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 OR1E3Q8WZA6 343 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 MR1Q95460 341 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 ISOC2Q96AB3 205 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 BMFQ96LC9 184 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 CNN2Q99439 309 aaKnown RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 TEAD3Q99594 435 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 NRSN2Q9GZP1 204 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 GSKIPQ9P0R6 139 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 METTL1Q9UBP6 276 aaKnown RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 ZNF780BQ9Y6R6 833 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 TP53BP1Q12888 1972 aaPredicted RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 CHD5Q8TDI0 1954 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 TDRD6O60522 2096 aaKnown RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 A6NLC8 198 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 HMGN4O00479 90 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 SERPINA5P05154 406 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 NR2C1P13056 603 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 THBS2P35442 1172 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 PRLHRP49683 370 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 FXYD6P3P58550 94 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 ISXQ2M1V0 245 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 RPL22L1Q6P5R6 122 aaKnown RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 SLC35F3Q8IY50 421 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 FAM24BQ8N5W8 94 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 OR4D11Q8NGI4 311 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 NUBPLQ8TB37 319 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 AKR1E2Q96JD6 320 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 CCNL2Q96S94 520 aaPredicted RBP7.9□□□□□ -1.14
DDB1-217ENST00000540166 GGACTQ9BVM4 153 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 RARRES3Q9UL19 164 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 MED31Q9Y3C7 131 aa7.9□□□□□ -1.14
DDB1-217ENST00000540166 LAMA2P24043 3122 aaKnown RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 IGLV3-16A0A075B6K0 115 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 NPIPB8E9PQR5 432 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 ADAM10O14672 748 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 MAGEB4O15481 346 aaPredicted RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 NDUFS4O43181 175 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 CYTIPO60759 359 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 FBXO24O75426 580 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 HMGN2P05204 90 aaKnown RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 RIDAP52758 137 aaKnown RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 C21orf58P58505 322 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 TAS2R19P59542 299 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 CCL7P80098 99 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 CYCSP99999 105 aaKnown RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 ELAVL1Q15717 326 aaKnown RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 RNASE10Q5GAN6 216 aaKnown RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 ZNF620Q6ZNG0 422 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 ZNF584Q8IVC4 421 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 NKAIN4Q8IVV8 208 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 OR14K1Q8NGZ2 314 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 CPNE4Q96A23 557 aaPredicted RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 DTD2Q96FN9 168 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 SLC25A21Q9BQT8 299 aaPredicted RBP7.9□□□□□ -1.15
DDB1-217ENST00000540166 LRRC61Q9BV99 259 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 RHBGQ9H310 441 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 SRMSQ9H3Y6 488 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 TMEM27Q9HBJ8 222 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 FGF22Q9HCT0 170 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 MAN2C1Q9NTJ4 1040 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 SLC7A7Q9UM01 511 aa7.9□□□□□ -1.15
DDB1-217ENST00000540166 hCG_1809904A0A1W2PP81 198 aa7.89□□□□□ -1.15
DDB1-217ENST00000540166 A0A1W2PR64 198 aa7.89□□□□□ -1.15
DDB1-217ENST00000540166 A0A1W2PRV1 198 aa7.89□□□□□ -1.15
DDB1-217ENST00000540166 ZNF736B4DX44 427 aaPredicted RBP7.89□□□□□ -1.15
DDB1-217ENST00000540166 GPR37O15354 613 aa7.89□□□□□ -1.15
DDB1-217ENST00000540166 SLC31A2O15432 143 aa7.89□□□□□ -1.15
DDB1-217ENST00000540166 GPRIN2O60269 458 aa7.89□□□□□ -1.15
DDB1-217ENST00000540166 BRINP1O60477 761 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms