RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SNAP29O95721 258 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 PTHP01270 115 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 STOMP27105 288 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 NOS3P29474 1203 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 GLRXP35754 106 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 ERVS71-1P61550 626 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 RAB35Q15286 201 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 TBC1D28Q2M2D7 210 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 ZNF774Q6NX45 483 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 LRP11Q86VZ4 500 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 JAZF1Q86VZ6 243 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 ZCCHC24Q8N2G6 241 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 NPEPL1Q8NDH3 523 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 OR52E2Q8NGJ4 325 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 MRPL24Q96A35 216 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 SORCS2Q96PQ0 1159 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 SNX18Q96RF0 628 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 DDOQ99489 341 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 MRPL37Q9BZE1 423 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 C1orf198Q9H425 327 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 GSX1Q9H4S2 264 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 CDH20Q9HBT6 801 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 RPRD1BQ9NQG5 326 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 B9D1Q9UPM9 204 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 CMAHPQ9Y471 501 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 C12orf71A8MTZ7 269 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 GNGT2O14610 69 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 RENP00797 406 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 FOSL1P15407 271 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 HOXB6P17509 224 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 PRKACGP22612 351 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 APLNRP35414 380 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 WNT5AP41221 380 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 SNRPD2P62316 118 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 GK3PQ14409 553 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 MEP1BQ16820 701 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 RPL13AP3Q6NVV1 102 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 CD300LDQ6UXZ3 194 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 ASRGL1Q7L266 308 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 OR52L1Q8NGH7 329 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 OR4Q3Q8NH05 313 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 C11orf40Q8WZ69 217 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 C18orf12Q96KH6 178 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 COX4I2Q96KJ9 171 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 SYT3Q9BQG1 590 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 TSSK6Q9BXA6 273 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 MMADHCQ9H3L0 296 aaPredicted RBP15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 NTN4Q9HB63 628 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 BARX1Q9HBU1 254 aaPredicted RBP15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 TBC1D23Q9NUY8 699 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 ARMC1Q9NVT9 282 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 PDP1Q9P0J1 537 aaPredicted RBP15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 MYEF2Q9P2K5 600 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 DNAJB9Q9UBS3 223 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 REV1Q9UBZ9 1251 aa15.74■□□□□ 0.11
SNRPA1-203ENST00000540017 C5orf49A4QMS7 147 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 ARRDC5A6NEK1 342 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 FAM171A2A8MVW0 826 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 SMAD7O15105 426 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 TIPRLO75663 272 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 GAAP10253 952 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 BMP4P12644 408 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 GSTM3P21266 225 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 CCNOP22674 350 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 CRABP1P29762 137 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 CENPAP49450 140 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 NUDT6P53370 316 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 UCP2P55851 309 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 PCBD1P61457 104 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 CCNIQ14094 377 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 KCNMB1Q16558 191 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 SYT9Q86SS6 491 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 ZBTB46Q86UZ6 589 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 LNX2Q8N448 690 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 CYB561A3Q8NBI2 242 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 OR1J2Q8NGS2 313 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 ZNRF4Q8WWF5 429 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 UTP4Q969X6 686 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 VRK1Q99986 396 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 BDH2Q9BUT1 245 aa15.73■□□□□ 0.11
SNRPA1-203ENST00000540017 VSTM5A8MXK1 200 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 TFP02787 698 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 INHBBP09529 407 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 PCSK6P29122 969 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 PPOXP50336 477 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 EFNA4P52798 201 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 LSM6P62312 80 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 C1orf146Q5VVC0 180 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 ZNF101Q8IZC7 436 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 ZNF525Q8N782 197 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 SLC26A10Q8NG04 563 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 RACGAP1Q9H0H5 632 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 YY1AP1Q9H869 796 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 ASH2LQ9UBL3 628 aa15.72■□□□□ 0.11
SNRPA1-203ENST00000540017 E2F6O75461 281 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 CLPTM1O96005 669 aa15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 F12P00748 615 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-203ENST00000540017 GDI2P50395 445 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms