RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 NDUFAF7Q7L592 441 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 MAMDC2Q7Z304 686 aaPredicted RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 TMED4Q7Z7H5 227 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 TMEM17Q86X19 198 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 SLC22A18ASQ8N1D0 253 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 BPIFB2Q8N4F0 458 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 ZNF519Q8TB69 540 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 PMEPA1Q969W9 287 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 PTX4Q96A99 478 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 SLC46A1Q96NT5 459 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 NXF5Q9H1B4 397 aaKnown RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 WDR13Q9H1Z4 485 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 SLC6A15Q9H2J7 730 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 TMEM185BQ9H7F4 350 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 VSX1Q9NZR4 365 aaPredicted RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 MSRAQ9UJ68 235 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 MRTO4Q9UKD2 239 aaKnown RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 PLCL2Q9UPR0 1127 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 MRPS18BQ9Y676 258 aaKnown RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 A0A0C4DFX4 3053 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 BCL2L11O43521 198 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 NDUFA2O43678 99 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 NUDT21O43809 227 aaKnown RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 RAD1O60671 282 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ALOX12BO75342 701 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 MT-ATP6P00846 226 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 CNR1P21554 472 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 CD34P28906 385 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 STARP49675 285 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 RIDAP52758 137 aaKnown RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 INSM1Q01101 510 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 ZNF117Q03924 483 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 MFGE8Q08431 387 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 ZNF169Q14929 603 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 VWA2Q5GFL6 755 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 C1orf100Q5SVJ3 147 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 C1QL3Q5VWW1 255 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ACOT7LQ6ZUV0 252 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ADGRE4PQ86SQ3 457 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 FAM160A2Q8N612 972 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 OR5T2Q8NGG2 359 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 OR1J2Q8NGS2 313 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 OR13C8Q8NGS7 320 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 PTPMT1Q8WUK0 201 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 METTL21AQ8WXB1 218 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 MMABQ96EY8 250 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 TCTN2Q96GX1 697 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ZNF285Q96NJ3 590 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 GAS2L1Q99501 681 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 SLC6A7Q99884 636 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 IGFLR1Q9H665 355 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 TAS2R4Q9NYW5 299 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 TAS2R3Q9NYW6 316 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 COMMD9Q9P000 198 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 GTF2A1LQ9UNN4 478 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 LAMA3Q16787 3333 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 FRG2CA6NGY1 282 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 DISC1C4P0D8 188 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 C11orf98E9PRG8 122 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ABCD4O14678 606 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 SLC16A7O60669 478 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 SRSF10O75494 262 aaKnown RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 GP1BAP07359 652 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 SPARCP09486 303 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 MPZP25189 248 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 RORAP35398 523 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 PMPCAQ10713 525 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 MEF2DQ14814 521 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ACKR1Q16570 336 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 SGCBQ16585 318 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 KIF26BQ2KJY2 2108 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ZNF542PQ5EBM4 170 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 TMEM31Q5JXX7 168 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 SLC25A42Q86VD7 318 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ZNF321PQ8N8H1 164 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 BPIFCQ8NFQ6 507 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 OR10Z1Q8NGY1 313 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 ZBTB8AQ96BR9 441 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 LRRC46Q96FV0 321 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 SLC25A44Q96H78 314 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 NPAS1Q99742 590 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 VRK1Q99986 396 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 ABHD6Q9BV23 337 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 TXNIPQ9H3M7 391 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 PCDHB16Q9NRJ7 776 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 SLC2A8Q9NY64 477 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 CGGBP1Q9UFW8 167 aaPredicted RBP8.69□□□□□ -1.02
CDH13-204ENST00000539548 FBXO4Q9UKT5 387 aa8.69□□□□□ -1.02
CDH13-204ENST00000539548 CACNA1CQ13936 2221 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 CPAMD8Q8IZJ3 1885 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 LOC390937A0A1W2PQ73 354 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 OR14I1A6ND48 311 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 C10orf142B7Z368 130 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 DXOO77932 396 aaKnown RBP8.68□□□□□ -1.02
CDH13-204ENST00000539548 IL2RAP01589 272 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ZNF28P17035 718 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 RAB3AP20336 220 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 RAB6AP20340 208 aa8.68□□□□□ -1.02
CDH13-204ENST00000539548 ZBTB25P24278 435 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms